Package: RTNduals
Type: Package
Title: Analysis of co-regulatory network motifs and inference of 'dual
        regulons'
Version: 1.2.0
Author: Vinicius S. Chagas, Clarice S. Groeneveld, Gordon Robertson, Kerstin B. Meyer, Mauro A. A. Castro
Maintainer: Vinicius Chagas <chagas.vis@gmail.com>, Clarice Groeneveld <clari.groeneveld@gmail.com>, Mauro Castro <mauro.castro@ufpr.br>
Depends: R (>= 3.3.3), methods, RTN(>= 1.15.6)
Imports: graphics, grDevices, stats, utils
Suggests: knitr, rmarkdown, BiocStyle, RUnit, BiocGenerics
Description: RTNduals is a tool that searches for possible co-regulatory loops between regulon pairs generated by the RTN package. It compares the shared targets in order to infer 'dual regulons', a new concept that tests whether regulon pairs agree on the predicted downstream effects.
License: Artistic-2.0
biocViews: GeneRegulation, GeneExpression, GeneticVariability,
        GeneSetEnrichment, NetworkEnrichment, NetworkInference,
        GraphAndNetwork
LazyData: TRUE
VignetteBuilder: knitr
RoxygenNote: 6.0.1
NeedsCompilation: no
Packaged: 2017-10-31 02:03:22 UTC; biocbuild
Built: R 3.4.2; ; 2017-10-31 07:48:48 UTC; windows
