ApoA1                   Gene expression dataset from the ApoA1
                        Experiment
DEDS-class              DEDS Result List - class
affySpikeIn             Gene expression dataset from Affymetrix
                        Spike-in Experiments
aggregateFun            Aggregate Statistical Functions for DEDS
comp.B                  Computing B-statistics for Differential
                        Expression
comp.F                  Computing F-statistic for Differential
                        Expression
comp.FC                 Computing Fold Change for Differential
                        Expression
comp.SAM                Computing SAM Statistics for Differential
                        Expression
comp.adjp               Computing permutation based step-down maxT
                        adjusted p values for each row of a matrix
comp.ebayes             Computing Empirical Bayes Statistics for
                        Differential Expression
comp.fdr                Computing permutation based q values
                        controlling false discovery rate for each row
                        of a matrix
comp.modF               Computing Moderated t-statistics for
                        Differential Expression
comp.modt               Computing Moderated t-statistics for
                        Differential Expression
comp.stat               Computing Test Statistics for Differential
                        Expression
comp.t                  Computing One and Two Sample t-statistic for
                        Differential Expression
comp.unadjp             Computing permutation based unadjusted p values
                        for each row of a matrix
deds.chooseTest         Selection of the Most Common Statistics for
                        Differential Expression
deds.genExtra           Generating Extra Parameters for Test Statistics
                        Functions for Differential Expression
deds.pval               Differential Expression via Distance Summary of
                        p Values from Multiple Models
deds.stat               Differential Expression via Distance Summary of
                        Multiple Statistics
deds.stat.linkC         Differentail Expression via Distance Summary of
                        Multiple Statistics
hist-methods            Histogram for DEDS Objects
pairs-methods           Pairs Plot for DEDS Objects
qqnorm-methods          Normal Q-Q Plot for DEDS Objects
topgenes                Table of Top Genes from DEDS
