562337bb46e3a64153ebf503bf2599e3 *CITATION
7dd017d32c25e7f1b4c213122186efa2 *DESCRIPTION
47b982ab8b5338b81d4a6e931dccd8e5 *INDEX
4f3175aa12f245a0572bbaf82bb6d256 *Meta/Rd.rds
a46f1debdc1f45796be2b2a0e6b3b378 *Meta/features.rds
f061a52ae618dfb40bef479d73d7acef *Meta/hsearch.rds
0b890a567bfd49db1e908f94e4cf39c5 *Meta/links.rds
0d375163246eeee36f5cd0c7abb41acb *Meta/nsInfo.rds
c3a376aa957a9d7b59ef45bc61446174 *Meta/package.rds
ead8ae91ac8131aef2cd6e3d48ae67c0 *Meta/vignette.rds
b32a715fece9d0d0bb880ae1359c93da *NAMESPACE
7c94e345b80d4eac2181c928b71e5ff3 *NEWS
ebf0fc819595d631b8bf280c4b049940 *R/CRISPRseek
c460d84947870f56d946accbba71af32 *R/CRISPRseek.rdb
008ba4eb8157528c7f44b2a8ba5c4713 *R/CRISPRseek.rdx
65e7f71085adce0a55664b1e9c62fbed *doc/CRISPRseek.R
8975bc7035900949abde1c27ba074159 *doc/CRISPRseek.Rnw
aa75477a0d85a193c21e468810f86f90 *doc/CRISPRseek.pdf
67f99e108af1d5f08ca5dc71409d465b *doc/index.html
40ca0fe9fcc50f22cf2eab911a0e162a *extdata/DoenchNBT2014.csv
3d9c1d814907b44782136daae9e164a7 *extdata/ForTestinguniqueREs.RData
27a8747ae646f5ee6d63b6608df2f306 *extdata/NEBenzymes.fa
75351020e8e1357af78ca004f1c93349 *extdata/NatureBiot2016SuppTable19DoenchRoot.csv
79be1f4fb1d484990d4a9353ef1a54a3 *extdata/RIPK1stop.fa
9e99a4998da29c0001658021a5163246 *extdata/T2.fa
652b596e1a437cd3070bc7afb64c423f *extdata/T2plus100OffTargets.bed
159422761901c39904cc3e89c6912703 *extdata/cpf1.fa
82331a32ca548f165d4309af09b6bb7b *extdata/gRNAProvidedSearch/OfftargetAnalysis.xls
dd28d1d41051ea0336d74e5efb12720b *extdata/gRNAProvidedSearch/REcutDetails.xls
2606d8c2793f3e8724aa0809a93e7b79 *extdata/gRNAProvidedSearch/Summary.xls
793bccad58fe016a62dbd732a880bfbd *extdata/gRNAProvidedSearch/gRNAsCRISPRseek.bed
b2d629c5aa9d1d4222383b3c4f7dfdb8 *extdata/gRNAProvidedSearchNOoffTarget/OfftargetAnalysis.xls
5ebcea0b6def026771d999eb235f474d *extdata/gRNAProvidedSearchNOoffTarget/Summary.xls
bb2c872180d615bc2a706c194fa650d6 *extdata/gRNAProvidedSearchNOoffTargetNoAnn/OfftargetAnalysis.xls
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5ebcea0b6def026771d999eb235f474d *extdata/gRNAProvidedSearchNOoffTargetNoAnn/Summary.xls
087b72b30748ac17d7ce19ae7c679028 *extdata/gRNAProvidedSearchNOoffTargetNoAnn/gRNAsCRISPRseek.bed
e331ca983b0eca0d6ed1f8d9eb811534 *extdata/hits.txt
59f3774a3bd7f3c0493dd3844bc81e12 *extdata/inputseq.fa
98587f5579498517926268823b12bdad *extdata/pairedSearch/withRE/OfftargetAnalysis.xls
970bdd23900722433bea7f9fd0187f54 *extdata/pairedSearch/withRE/REcutDetails.xls
c0913d954b5da5adae22613f6d877b6d *extdata/pairedSearch/withRE/Summary.xls
f9f2bd5d46ff60d6c2c57a0bb36b25f7 *extdata/pairedSearch/withRE/pairedgRNAs.xls
98587f5579498517926268823b12bdad *extdata/pairedSearch/withoutRE/OfftargetAnalysis.xls
970bdd23900722433bea7f9fd0187f54 *extdata/pairedSearch/withoutRE/REcutDetails.xls
c0913d954b5da5adae22613f6d877b6d *extdata/pairedSearch/withoutRE/Summary.xls
f9f2bd5d46ff60d6c2c57a0bb36b25f7 *extdata/pairedSearch/withoutRE/pairedgRNAs.xls
d43302aca1ab1102d4eb796d49c8902a *extdata/recreateTestResults.R
92c09c9c3cf89a721b3dc843877b896f *extdata/rs362331C.fa
59de9309b8be7aca7ddf7afca89c3226 *extdata/rs362331T.fa
d8e904f3217ee661a6840af4ad718cff *extdata/seqs2.5prime.RData
0fd26c190f484e03de21ef14aed2d04c *extdata/seqs2.RData
a136deb5b5b0b6e6a26dfae9c5aa68d6 *extdata/seqs2CFD.RData
118462f42f3946779cb25165095f7e30 *extdata/test.bed
79d12e401109aa217909b3ab87ed8837 *extdata/testHsap_GATA1_ex2_gRNA1.fa
2cafc5e2ec848bdbb4a38cd9d6088200 *extdata/testMouse/NOTannotateExon/OfftargetAnalysis.xls
ce6b75c75db53d846168ddbdc2637bc4 *extdata/testMouse/NOTannotateExon/REcutDetails.xls
422d793f13b9d29590546d4d5221b7cd *extdata/testMouse/NOTannotateExon/RIPK1stopallgRNAs.fa
36771958927359cf79089919866b057d *extdata/testMouse/NOTannotateExon/Summary.xls
beff7a5dd7d6dcf1ae438ddda3315b46 *extdata/testMouse/NOTannotateExon/mRIPK1stop.gbk
126ee7da5eecc5314847a38964862e3f *extdata/testMouse/NOTannotateExon/pairedgRNAs.xls
0a1d173914d74649a932443e4cf38927 *extdata/testMouse/NOorgAnn/OfftargetAnalysis.xls
ce6b75c75db53d846168ddbdc2637bc4 *extdata/testMouse/NOorgAnn/REcutDetails.xls
422d793f13b9d29590546d4d5221b7cd *extdata/testMouse/NOorgAnn/RIPK1stopallgRNAs.fa
36771958927359cf79089919866b057d *extdata/testMouse/NOorgAnn/Summary.xls
beff7a5dd7d6dcf1ae438ddda3315b46 *extdata/testMouse/NOorgAnn/mRIPK1stop.gbk
126ee7da5eecc5314847a38964862e3f *extdata/testMouse/NOorgAnn/pairedgRNAs.xls
5119f100237b656ca64ec08096b0cd40 *extdata/testMouse/WithorgAnn/OfftargetAnalysis.xls
ce6b75c75db53d846168ddbdc2637bc4 *extdata/testMouse/WithorgAnn/REcutDetails.xls
422d793f13b9d29590546d4d5221b7cd *extdata/testMouse/WithorgAnn/RIPK1stopallgRNAs.fa
36771958927359cf79089919866b057d *extdata/testMouse/WithorgAnn/Summary.xls
beff7a5dd7d6dcf1ae438ddda3315b46 *extdata/testMouse/WithorgAnn/mRIPK1stop.gbk
126ee7da5eecc5314847a38964862e3f *extdata/testMouse/WithorgAnn/pairedgRNAs.xls
f013b7305c5bcd9a4fb86db2601d381d *extdata/testNoTarget/OfftargetAnalysis.xls
f1a0839b56869f0a64ec7f7362072b10 *extdata/testNoTarget/Summary.xls
a6f08b245826a38aa777c78f4de245af *extdata/testNoTarget/negativeCntl-gRNA.fa
dc0f013bb098204d91711520a7520574 *extdata/testspeed.fa
ca191043e8dce8b421a3e95094b4b41c *extdata/tobi2.fa
b33bd6317003f10a22b09861b79131bb *extdata/unPairedSearch/withRE/OfftargetAnalysis.xls
66bc697673b565f7cb277fefb811567f *extdata/unPairedSearch/withRE/REcutDetails.xls
04d3f76489c7b06e272df62b544e428f *extdata/unPairedSearch/withRE/Summary.xls
f9f2bd5d46ff60d6c2c57a0bb36b25f7 *extdata/unPairedSearch/withRE/pairedgRNAs.xls
a6937793a5bcd362c675962c28d72945 *extdata/unPairedSearch/withoutRE/OfftargetAnalysis.xls
66bc697673b565f7cb277fefb811567f *extdata/unPairedSearch/withoutRE/REcutDetails.xls
18181139bd8a207769122a600fedc224 *extdata/unPairedSearch/withoutRE/Summary.xls
f9f2bd5d46ff60d6c2c57a0bb36b25f7 *extdata/unPairedSearch/withoutRE/pairedgRNAs.xls
a66a960a73fed17af5a481df2af4e287 *help/AnIndex
182f08634967214f21ba955cfbbd700b *help/CRISPRseek.rdb
645632daabccc4197c4be1fd61863460 *help/CRISPRseek.rdx
38c71d8dd5b420d8fda574901439d851 *help/aliases.rds
3fe6d2d9845afdec714b38613f4691d9 *help/paths.rds
a4e63b35dfaba68e3aaca93c46d96a9b *html/00Index.html
b6763e6916890c631fdc3f2643803b1a *html/R.css
2ccb3db8ef3b36a116616cbfa2681fab *unitTests/test_compare2Sequences.R
29d3d38d8716ca4a3f428b7648d42163 *unitTests/test_gRNAprovidedCompare2Seqs.R
ff9a7620b9a2e518795575c1b430a495 *unitTests/test_gRNAprovidedNoPAM.R
25fb37ac30f2eb504252c0ea6836a389 *unitTests/test_getOfftargetScore2.R
9d3b2f05e68d63b36a3c4802ab95fc5d *unitTests/test_mouse_orgAnn_annotateExon.R
3bcdd853cb16be58fd77250fd7ff8e90 *unitTests/test_offTargetAnalysis.R
9dcd32e4f4a759ef0f90ef6ba9e5d937 *unitTests/test_targetNotFound.R
