COHCAP.BSSeq.preprocess
                        Preprocessing for Targeted BS-Seq data
COHCAP.annotate         Annotation for CpG Sites
COHCAP.avg.by.island    CpG Island Differential Methylation Analysis
                        (Average by Island Workflow).
COHCAP.avg.by.site      CpG Island Differential Methylation Analysis
                        (Average by Site Workflow).
COHCAP.denovo           De-Novo Identification of Differentially
                        Methylated CpG Site Clusters
COHCAP.integrate.avg.by.island
                        Integration with Gene Expression Data(Average
                        by Island Workflow).
COHCAP.integrate.avg.by.site
                        Integration with Gene Expression Data(Average
                        by Site Workflow).
COHCAP.qc               DNA Methylation Quality Control Statistics
COHCAP.reformatFinalReport
                        Prepare COHCAP beta file from Illumina
                        GenomeStudio Final Report
COHCAP.site             CpG Site Differential Methylation Analysis
