import(methods,
       Rsamtools,
       Biostrings,
       reshape,
       ggplot2,
       RColorBrewer
       )
importFrom("graphics", "hist")
importFrom("stats", "aggregate", "density")
importFrom("utils", "setTxtProgressBar", "txtProgressBar")

exportClasses(
    "logicalORmissing"
    )

exportMethods("plotPP",
              "plotDistro",
              "plotFreq",
              "plotRegion",
              "readBam",
              "pingpong",
              "ntfreq",
              "getCountMatrix"
              )