IsomirDataSeq-class     Class that contains all isomiRs annotation for
                        all samples
IsomirDataSeqFromFiles
                        'IsomirDataSeqFromFiles' loads miRNA annotation
                        from seqbuster tool
counts                  Accessors for the count matrix of a
                        IsomirDataSeq object.
design                  Accessors for the 'design' slot of a
                        IsomirDataSeq object.
find_targets            Find miRNAs target using mRNA/miRNA expression
isoCounts               Create count matrix with different summarizing
                        options
isoDE                   Differential expression analysis with DESeq2
isoNetwork              Clustering miRNAs-genes pairs in similar
                        pattern expression
isoNorm                 Normalize count matrix
isoPLSDA                Partial Least Squares Discriminant Analysis for
                        'IsomirDataSeq'
isoPLSDAplot            Plot components from isoPLSDA analysis (pairs
                        plot)
isoPlot                 Plot the amount of isomiRs in different samples
isoPlotNet              Functional miRNA / gene expression profile plot
isoPlotPosition         Plot nucleotides changes at a given position
isoSelect               Method to select specific miRNAs from an
                        IsomirDataSeq object.
isoTop                  Heatmap of the top expressed isomiRs
mirData                 Example of IsomirDataSeq with human brain miRNA
                        counts data
