GSEA.barplot            Visualize the gene set enrichment analysis
ORA                     Over-representation Analysis
ORA.dotplot             Visualize the over-representation analysis
PPInfer-package         Inferring functionally related proteins using
                        protein interaction networks
enrich.net              Visualize network for the functional enrichment
                        analysis
net.infer               Inferring functionally related proteins using
                        networks
net.infer.ST            Inferring functionally related proteins with
                        self training
net.kernel              Kernel matrix for a graph
ppi.infer.human         Inferring functionally related proteins using
                        protein networks for human
ppi.infer.mouse         Inferring functionally related proteins using
                        protein networks for mouse
self.train.kernel       Self training for a kernel matrix
