Package: trio
Type: Package
Title: Testing of SNPs and SNP Interactions in Case-Parent Trio Studies
Version: 3.12.0
Date: 2015-12-31
Author: Holger Schwender, Qing Li, Philipp Berger, Christoph Neumann, Margaret Taub, Ingo Ruczinski
Maintainer: Holger Schwender <holger.schw@gmx.de>
Depends: R (>= 3.0.1)
Suggests: survival, haplo.stats, mcbiopi, siggenes, splines, LogicReg
        (>= 1.5.3), logicFS (>= 1.28.1), KernSmooth, VariantAnnotation
Description: Testing SNPs and SNP interactions with a genotypic TDT. This package
   furthermore contains functions for computing pairwise values of LD measures and 
   for identifying LD blocks, as well as functions for setting up matched 
   case pseudo-control genotype data for case-parent trios in order to run 
   trio logic regression, for imputing missing genotypes in trios, for simulating 
   case-parent trios with disease risk dependent on SNP interaction, and for 
   power and sample size calculation in trio data.
License: LGPL-2
biocViews: SNP, GeneticVariability, Microarray, Genetics
NeedsCompilation: no
Packaged: 2016-10-17 23:39:55 UTC; biocbuild
Built: R 3.3.1; ; 2016-10-18 05:08:19 UTC; windows
