WideSomaLogicData       Create a WideSomaLogicData object
[.WideSomaLogicData     Indexing for WideSomaLogicData objects
aptamers                Sequence data for the Somalogic SOMAscan assay
as.ExpressionSet        Convert objects into ExpressionSets or MSnSets.
as.SummarizedExperiment
                        Convert objects into SummarizedExperiments
chromosomalPositions    Chromosomal Positions by SomaLogic AptamerId
colnamesStartWithSeqId
                        Does the input contain Sequence ID column
                        names?
convertSeqIdToAptamer   Convert SeqIds to Aptamers
createSampleSubmission
                        Create a SomaLogic Sample Submission Form
ensemblIds              Ensembl IDs by SomaLogic AptamerId
extractSampleData       Extract the sample datasets
getChromosomalPositions
                        Get Chromosomal Positions by AptamerId
getEnsemblIds           Get Ensembl IDs by AptamerId
getGoMolecularFunctions
                        GO definitions by AptamerId
getIntensities          Get WideSomaLogicData attributes
getKeggDefinitions      KEGG definitions, modules, and pathways by
                        AptamerId
getPfam                 Get PFAM IDs by AptamerId
getSequencesWithLargestBetweenGroupVariation
                        Get sequences with the largest between group
                        variation
getUniProtKeywords      Get UniProt Keywords by AptamerId
goMolecularFunction     GO definitions by SomaLogic AptamerId
isPass                  Is the value a pass
keggDefinitions         KEGG definitions, modules, and pathways by
                        SomaLogic AptamerId
melt.WideSomaLogicData
                        Melt a WideSomaLogicData object
pfam                    PFAM IDs by SomaLogic AptamerId
readAdat                Read a SomaLogic data file
readComments            Read SomaLogic Sample Submission Comments File
readControls            Read SomaLogic Sample Submission Controls File
readFirstChar           Read the first character of each line
readSamples             Read SomaLogic Sample Submission Samples File
readSlides              Read SomaLogic Sample Submission Slides File
readat-defunct          Defunct objects in readat
uniprotKeywords         UniProt Keywords by SomaLogic AptamerId
writeSampleSubmissionForm
                        Write a SomaLogic sample submission form
