PairContrast            Pairwise comparison matrix
Rmaanova.version        Display the current version of the package
abf1                    Data for a 18-array Affymetrix experiment
adjPval                 Generate FDR adjusted P values for F test
                        result.
arrayview               View the layout of input data
consensus               Build consensus tree out of bootstrap cluster
                        result
dyeswapfilter           Gene filter for dye-swap experiment
fill.missing            Fill in missing data
fitmaanova              Fit ANOVA model for Micro Array experiment
fom                     Figure of Merit
geneprofile             Expression plot for selected genes
gridcheck               Plot grid-by-grid data comparison for arrays
kidney.raw              Kidney Data from CAMDA
macluster               Clustering analysis for Microarray experiment
matest                  Statistical test for Microarray experiment
read.madata             Read Microarray data
resiplot                Residual plot for Microarray Experiment
riplot                  Ratio intensity plot for 2-dye Microarray
                        experiment
subset.madata           Subsetting Microarray data objects
summarytable            Summarize the matest result.
transform.madata        Micro Array experiment data transformation
varplot                 Variance component plot
volcano                 Volcano plot for F test results
write.madata            Write Micro Array data to a TAB delimited
                        simple text file
