cleanUpdTSeq-package	cleanUpdTSeq-package
$,featureVector-method	featureVector-class
$,modelInfo-method	modelInfo-class
$,naiveBayes-method	naiveBayes
$,PASclassifier-method	PASclassifier-class
$<-,featureVector-method	featureVector-class
$<-,modelInfo-method	modelInfo-class
$<-,naiveBayes-method	naiveBayes
$<-,PASclassifier-method	PASclassifier-class
BED2GRangesSeq	BED2GRangesSeq
buildClassifier	buildClassifier
buildFeatureVector	buildFeatureVector
classifier	classifier
cleanUpdTSeq	cleanUpdTSeq-package
data.NaiveBayes	data.NaiveBayes
featureVector	featureVector-class
featureVector-class	featureVector-class
getDownstreamSequence	getDownstreamSequence
getUpstreamSequence	getUpstreamSequence
modelInfo	modelInfo-class
modelInfo-class	modelInfo-class
naiveBayes	naiveBayes
naiveBayes-class	naiveBayes
PASclassifier	PASclassifier-class
PASclassifier-class	PASclassifier-class
predictTestSet	predictTestSet
