baySeq-package	baySeq-package
allModels	allModels
baySeq	baySeq-package
baySeq-class	baySeq-classes
baySeq-classes	baySeq-classes
bbDensity	densityFunctions
bbNCDist	densityFunctions
bimodalSeparator	bimodalSep
CDPost	CDPost
CDPriors	CDPriors
countData	baySeq-classes
countData-class	baySeq-classes
densityFunction	baySeq-classes
densityFunction,countData-method	baySeq-classes
densityFunction-class	densityFunction
densityFunction<-	baySeq-classes
densityFunction<-,countData-method	baySeq-classes
densityFunctions	densityFunctions
dim,countData-method	baySeq-classes
getLibsizes	getLibsizes
getLikelihoods	getLikelihoods
getLikelihoods.BB	getLikelihoods
getLikelihoods.NB	getLikelihoods
getPosteriors	getPosteriors
getPriors	getPriors
getPriors.BB	getPriors
getPriors.NB	getPriors
getTPs	getTPs
groups	baySeq-classes
groups,countData-method	baySeq-classes
groups<-	baySeq-classes
groups<-,countData-method	baySeq-classes
libsizes	baySeq-classes
libsizes,countData-method	baySeq-classes
libsizes,pairedData-method	baySeq-classes
libsizes<-	baySeq-classes
libsizes<-,countData-method	baySeq-classes
libsizes<-,pairedData-method	baySeq-classes
makeOrderings	makeOrderings
marginaliseEqual	marginaliseEqual
marginalisePairwise	marginalisePairwise
md2Density	densityFunctions
md3Density	densityFunctions
mdDensity	densityFunctions
methObservables	methObservables
mobAnnotation	mobAnnotation
mobData	mobData
nbinomDensity	densityFunctions
normDensity	densityFunctions
pairData	pairData
pairedData	baySeq-classes
pairedData-class	baySeq-classes
plotMA.CD	plotMA.CD
plotNullPrior	plotNullPrior
plotPosteriors	plotPosteriors
plotPriors	plotPriors
rbind	baySeq-classes
rbind,countData-method	baySeq-classes
replicates	baySeq-classes
replicates,countData-method	baySeq-classes
replicates<-	baySeq-classes
replicates<-,countData-method	baySeq-classes
seglens	baySeq-classes
seglens,countData-method	baySeq-classes
seglens<-	baySeq-classes
seglens<-,countData-method	baySeq-classes
selectTop	selectTop
show,countData-method	baySeq-classes
show,pairedData-method	baySeq-classes
simData	simData
summarisePosteriors	summarisePosteriors
topCounts	topCounts
zimData	zimData
ZINBDensity	densityFunctions
[,countData,ANY-method	baySeq-classes
[,countData-method	baySeq-classes
[,pairedData-method	baySeq-classes
