alpine-package	alpine-package
buildFragtypes	buildFragtypes
ebt.fit	preprocessedData
ebt.theta	preprocessedData
estimateAbundance	estimateAbundance
extractAlpine	extractAlpine
fitBiasModels	fitBiasModels
fitpar	preprocessedData
fitpar.small	preprocessedData
genes.theta	preprocessedData
getFragmentWidths	getFragmentWidths
getReadLength	getReadLength
mergeGenes	mergeGenes
normalizeDESeq	normalizeDESeq
plotFragLen	plotFragLen
plotGC	plotGC
plotGRL	plotGRL
plotOrder0	plotOrder0
plotOrder1	plotOrder0
plotOrder2	plotOrder0
plotRelPos	plotRelPos
predictCoverage	predictCoverage
preprocessedData	preprocessedData
res	preprocessedData
splitGenesAcrossChroms	splitGenesAcrossChroms
splitLongGenes	splitLongGenes
txdf.theta	preprocessedData
