e10079e1d7e2b2f0d32787e9880faa88 *DESCRIPTION
d2334b9afef2247e7507e63e10d6d42e *INDEX
653a35be964efc22220cc42472f0c022 *Meta/Rd.rds
4ec290eb0a52dcc1d1c50e7919c91a39 *Meta/data.rds
16febc8807353bd931b65d0051122a40 *Meta/hsearch.rds
a0298f3535adb643ac540c02c25b7b72 *Meta/links.rds
6ab45d793fedcb38aecfc1d6cfed91b5 *Meta/nsInfo.rds
7002f9c581659b436e68fd62a01e901f *Meta/package.rds
23f52f18bcb16b1049a5042f0a20747f *Meta/vignette.rds
babef55dd9c4843f9e19e2126f5405b7 *NAMESPACE
6c325dbd97b00899d0d1b119d385b52c *NEWS
ebf0fc819595d631b8bf280c4b049940 *R/TPP
681642cb88f34fa2f7c7ab6f30b87ca2 *R/TPP.rdb
11365d88d687692a30748f350af2ce59 *R/TPP.rdx
3b2e7f58a451bafc144053e0cf4a7083 *data/hdacCCR_smallExample.RData
f8b1baab71c2edb5c204a0d2da38f7d5 *data/hdacTR_resultsTable_smallExample.RData
b3013f12ee19b16668f58c7d5f875928 *data/hdacTR_smallExample.RData
2a54dcec92c9ec0e65f4024ca997b79c *data/panob2D_isobQuant_example.RData
97831bec7c2a69297560b12cf09ee8b6 *doc/NPARC_analysis_of_TPP_TR_data.R
69a9c06b7e1d08cd477d7352428aa07a *doc/NPARC_analysis_of_TPP_TR_data.Rnw
eb332a8006346d27b6e4bb4ce4abb72b *doc/NPARC_analysis_of_TPP_TR_data.pdf
b0222c6ce08dbd7ace6099047810c258 *doc/TPP_introduction_1D.R
ab6f390388a2fd301a56f6e517f57aca *doc/TPP_introduction_1D.Rnw
d0e3130a63b5f5ca5428aa69a8b73d62 *doc/TPP_introduction_1D.pdf
860ef6f2b30c758da014e5bc35baf239 *doc/TPP_introduction_2D.R
0f9d6b9f9ad0dec057e83fc4151344c5 *doc/TPP_introduction_2D.Rnw
ae6072acc1a4815ec10fd6bb3da5902b *doc/TPP_introduction_2D.pdf
052f2a5c2c502f4d20ca83cc95473fe3 *doc/index.html
2703e16750bbbb5496426743d43bdcfa *example_data/2D_example_data/exampleRunCCRInput.RData
c4df4f396442f81fd1987e0ab9a85fc7 *example_data/2D_example_data/fractAbundInData.RData
b8d3d7f1864608de37b83574ac477a1c *example_data/2D_example_data/hdac2D_config.txt
dc278f421f5ae48596b6f289e32a2901 *example_data/2D_example_data/panobinostat_2DTPP_smallExample.RData
3b5818e53185692d8afd5336fab69668 *example_data/2D_example_data/panobinostat_ex_confg.csv
77926387b04492a51eebe58ce3ae78f2 *example_data/2D_example_data/panobinostat_ex_confg.txt
46ad55fa5315b8680adad4ce3fafb6d6 *example_data/2D_example_data/referenceCCRConfig.RData
2316a758d2e77c3bab93715ba174875f *example_data/2D_example_data/referenceFcData.RData
b9f231613961d258afe24bcc7472c54b *example_data/2D_example_data/referenceNormData.RData
a2e7eddbdb8eb612c80ef979d31caaa4 *example_data/2D_example_data/referenceReadInData.RData
7ac1093552eaf281576d5f20e605e5d6 *example_data/2D_example_data/shortCCRresults.RData
bdaf865b9856729c2084de6081e72521 *example_data/2D_example_data/shortData2d.RData
f4d14590fe21a76f30fa18c3e5889ee7 *example_data/CCR_example_data/Panobinostat_TPP-CCR_config.xlsx
5e0f32079fbfa4b4e7ffcb5aec39c4e4 *example_data/CCR_example_data/panobinostat_1_merged_results_20150227_1017_proteins.txt
d41ccfe4fb92d18ac9daeecc1db7bf19 *example_data/CCR_example_data/panobinostat_2_merged_results_20150227_1110_proteins.txt
9354d118e09492f93f7b8bc8d1ca861d *example_data/TR_example_data/Panobinostat_TPP-TR_config.xlsx
0c67cbada22f6f71a009961f3e5b4358 *example_data/TR_example_data/panobinostat_1_merged_results_20150226_1013_proteins.txt
16b1e70d2e5c17c3bd55f0c9604a0683 *example_data/TR_example_data/panobinostat_2_merged_results_20150226_1139_proteins.txt
b829591e84c8a081a4d4ccb6b6862b7a *example_data/TR_example_data/vehicle_1_merged_results_20150227_0908_proteins.txt
fb36f922b446d48f649597a371ebdd62 *example_data/TR_example_data/vehicle_2_merged_results_20150227_0847_proteins.txt
1256b0a8d12397ba0a6e1ba06829eef6 *extdata/randomESet.Rdata
e5dfe3c3cf805dab702697c1d69a5acf *extdata/validationData_meltCurveFilter.Rdata
ac65d119549f18e6a29ef490492f7833 *extdata/validationData_pvalBinning.Rdata
5780f9c0ddd0e6bd267e6d7bc4a02c34 *extdata/validationData_pvalComputation.Rdata
022a8417163acb28568284b27f82306a *help/AnIndex
416c5985bb7c0460e3651feeb06811fe *help/TPP.rdb
5ade0b397c450a91b3984ab22bf32c01 *help/TPP.rdx
ae3e3fabf87f77dfb64f5c54254ff290 *help/aliases.rds
48b0e21ade2caa2ccc2b6c4b8f72bcb6 *help/paths.rds
f0a44cb91a2956b8b53d6acbaf1189f8 *html/00Index.html
b6763e6916890c631fdc3f2643803b1a *html/R.css
a131fcceb128328668c30dd31027c05d *tpp2d_report.Rmd
