# Identifies cell population in flow cytometry data.

## Documentation for package ‘SamSPECTRAL’ version 1.28.0

- DESCRIPTION file.
- User guides, package vignettes and other documentation.

## Help Pages

SamSPECTRAL-package | Identifying cell populations in flow cytometry data.
Building_Communities | Builds the communities from the set of all data points.
check.SamSPECTRAL.input | Checks the input to SamSPECTRAL.
Civilized_Spectral_Clustering | Runs the spectral clustering algorithm on the sample points.
ClusteringResult | Runs the spectral clustering algorithm on the sample points.
ClusteringResult-class | Runs the spectral clustering algorithm on the sample points.
Conductance_Calculation | Computes the conductance between communities.
Connecting | Combines the spectral clusters to build the connected components.
eigen.values.10 | Eigenvalues for building the SamSPECTRAL vignette.
eigen.values.1000 | Eigenvalues for building the SamSPECTRAL vignette.
kneepointDetection | Fits 2 regression lines to data to estimate the knee (or elbow) point.
SamSPECTRAL | Identifies the cell populations in flow cytometry data.
small | Flow cytometry data to test SamSPECTRAL algorithm.
stmFSC | Flow cytometry data to test SamSPECTRAL algorithm.