addCyEdge	addCyEdge
addCyEdge,CytoscapeWindowClass-method	addCyEdge
addCyNode	addCyNode
addCyNode,CytoscapeWindowClass-method	addCyNode
addGraphToGraph	addGraphToGraph
addGraphToGraph,CytoscapeWindowClass-method	addGraphToGraph
clearSelection	clearSelection
clearSelection,CytoscapeWindowClass-method	clearSelection
copyVisualStyle	copyVisualStyle
copyVisualStyle,CytoscapeConnectionClass-method	copyVisualStyle
createWindow	createWindow
createWindow,CytoscapeWindowClass-method	createWindow
createWindowFromSelection	createWindowFromSelection
createWindowFromSelection,CytoscapeWindowClass-method	createWindowFromSelection
cy2.edge.names	cy2.edge.names
cyPlot	cyPlot
CytoscapeConnection	CytoscapeConnection
CytoscapeConnectionClass-class	CytoscapeConnectionClass-class
CytoscapeWindow	CytoscapeWindow
CytoscapeWindowClass-class	CytoscapeWindowClass-class
deleteAllWindows	deleteAllWindows
deleteAllWindows,CytoscapeConnectionClass-method	deleteAllWindows
deleteEdgeAttribute	deleteEdgeAttribute
deleteEdgeAttribute,CytoscapeConnectionClass-method	deleteEdgeAttribute
deleteNodeAttribute	deleteNodeAttribute
deleteNodeAttribute,CytoscapeConnectionClass-method	deleteNodeAttribute
deleteSelectedEdges	deleteSelectedEdges
deleteSelectedEdges,CytoscapeWindowClass-method	deleteSelectedEdges
deleteSelectedNodes	deleteSelectedNodes
deleteSelectedNodes,CytoscapeWindowClass-method	deleteSelectedNodes
deleteWindow	deleteWindow
deleteWindow,CytoscapeConnectionClass-method	deleteWindow
demoSimpleGraph	demoSimpleGraph
displayGraph	displayGraph
displayGraph,CytoscapeWindowClass-method	displayGraph
dockPanel	dockPanel
dockPanel,CytoscapeConnectionClass-method	dockPanel
eda	eda
eda.names	eda.names
existing.CytoscapeWindow	existing.CytoscapeWindow
fitContent	fitContent
fitContent,CytoscapeWindowClass-method	fitContent
fitSelectedContent	fitSelectedContent
fitSelectedContent,CytoscapeWindowClass-method	fitSelectedContent
floatPanel	floatPanel
floatPanel,CytoscapeConnectionClass-method	floatPanel
getAdjacentEdgeNames	getAdjacentEdgeNames
getAllEdgeAttributes	getAllEdgeAttributes
getAllEdgeAttributes,CytoscapeWindowClass-method	getAllEdgeAttributes
getAllEdges	getAllEdges
getAllEdges,CytoscapeWindowClass-method	getAllEdges
getAllNodeAttributes	getAllNodeAttributes
getAllNodeAttributes,CytoscapeWindowClass-method	getAllNodeAttributes
getAllNodes	getAllNodes
getAllNodes,CytoscapeWindowClass-method	getAllNodes
getArrowShapes	getArrowShapes
getArrowShapes,CytoscapeConnectionClass-method	getArrowShapes
getAttributeClassNames	getAttributeClassNames
getAttributeClassNames,CytoscapeConnectionClass-method	getAttributeClassNames
getCenter	getCenter
getCenter,CytoscapeWindowClass-method	getCenter
getDefaultBackgroundColor	getDefaultBackgroundColor
getDefaultBackgroundColor,CytoscapeConnectionClass-method	getDefaultBackgroundColor
getDefaultEdgeReverseSelectionColor	getDefaultEdgeReverseSelectionColor
getDefaultEdgeReverseSelectionColor,CytoscapeConnectionClass-method	getDefaultEdgeReverseSelectionColor
getDefaultEdgeSelectionColor	getDefaultEdgeSelectionColor
getDefaultEdgeSelectionColor,CytoscapeConnectionClass-method	getDefaultEdgeSelectionColor
getDefaultNodeReverseSelectionColor	getDefaultNodeReverseSelectionColor
getDefaultNodeReverseSelectionColor,CytoscapeConnectionClass-method	getDefaultNodeReverseSelectionColor
getDefaultNodeSelectionColor	getDefaultNodeSelectionColor
getDefaultNodeSelectionColor,CytoscapeConnectionClass-method	getDefaultNodeSelectionColor
getDirectlyModifiableVisualProperties	getDirectlyModifiableVisualProperties
getDirectlyModifiableVisualProperties,CytoscapeConnectionClass-method	getDirectlyModifiableVisualProperties
getEdgeAttribute	getEdgeAttribute
getEdgeAttribute,CytoscapeConnectionClass-method	getEdgeAttribute
getEdgeAttributeNames	getEdgeAttributeNames
getEdgeAttributeNames,CytoscapeConnectionClass-method	getEdgeAttributeNames
getEdgeCount	getEdgeCount
getEdgeCount,CytoscapeWindowClass-method	getEdgeCount
getFirstNeighbors	getFirstNeighbors
getFirstNeighbors,CytoscapeWindowClass-method	getFirstNeighbors
getGraph	getGraph
getGraph,CytoscapeWindowClass-method	getGraph
getGraphFromCyWindow	getGraphFromCyWindow
getGraphFromCyWindow,CytoscapeConnectionClass-method	getGraphFromCyWindow
getLayoutNameMapping	getLayoutNameMapping
getLayoutNameMapping,CytoscapeConnectionClass-method	getLayoutNameMapping
getLayoutNames	getLayoutNames
getLayoutNames,CytoscapeConnectionClass-method	getLayoutNames
getLayoutPropertyNames	getLayoutPropertyNames
getLayoutPropertyNames,CytoscapeConnectionClass-method	getLayoutPropertyNames
getLayoutPropertyType	getLayoutPropertyType
getLayoutPropertyType,CytoscapeConnectionClass-method	getLayoutPropertyType
getLayoutPropertyValue	getLayoutPropertyValue
getLayoutPropertyValue,CytoscapeConnectionClass-method	getLayoutPropertyValue
getLineStyles	getLineStyles
getLineStyles,CytoscapeConnectionClass-method	getLineStyles
getNodeAttribute	getNodeAttribute
getNodeAttribute,CytoscapeConnectionClass-method	getNodeAttribute
getNodeAttributeNames	getNodeAttributeNames
getNodeAttributeNames,CytoscapeConnectionClass-method	getNodeAttributeNames
getNodeCount	getNodeCount
getNodeCount,CytoscapeWindowClass-method	getNodeCount
getNodePosition	getNodePosition
getNodePosition,CytoscapeWindowClass-method	getNodePosition
getNodeShapes	getNodeShapes
getNodeShapes,CytoscapeConnectionClass-method	getNodeShapes
getNodeSize	getNodeSize
getNodeSize,CytoscapeWindowClass-method	getNodeSize
getSelectedEdgeCount	getSelectedEdgeCount
getSelectedEdgeCount,CytoscapeWindowClass-method	getSelectedEdgeCount
getSelectedEdges	getSelectedEdges
getSelectedEdges,CytoscapeWindowClass-method	getSelectedEdges
getSelectedNodeCount	getSelectedNodeCount
getSelectedNodeCount,CytoscapeWindowClass-method	getSelectedNodeCount
getSelectedNodes	getSelectedNodes
getSelectedNodes,CytoscapeWindowClass-method	getSelectedNodes
getViewCoordinates	getViewCoordinates
getViewCoordinates,CytoscapeWindowClass-method	getViewCoordinates
getVisualStyleNames	getVisualStyleNames
getVisualStyleNames,CytoscapeConnectionClass-method	getVisualStyleNames
getWindowCount	getWindowCount
getWindowCount,CytoscapeConnectionClass-method	getWindowCount
getWindowID	getWindowID
getWindowID,CytoscapeConnectionClass-method	getWindowID
getWindowList	getWindowList
getWindowList,CytoscapeConnectionClass-method	getWindowList
getZoom	getZoom
getZoom,CytoscapeWindowClass-method	getZoom
hideAllPanels	hideAllPanels
hideAllPanels,CytoscapeConnectionClass-method	hideAllPanels
hideNodes	hideNodes
hideNodes,CytoscapeWindowClass-method	hideNodes
hidePanel	hidePanel
hidePanel,CytoscapeConnectionClass-method	hidePanel
hideSelectedEdges	hideSelectedEdges
hideSelectedEdges,CytoscapeWindowClass-method	hideSelectedEdges
hideSelectedNodes	hideSelectedNodes
hideSelectedNodes,CytoscapeWindowClass-method	hideSelectedNodes
initEdgeAttribute	initEdgeAttribute
initNodeAttribute	initNodeAttribute
invertEdgeSelection	invertEdgeSelection
invertEdgeSelection,CytoscapeWindowClass-method	invertEdgeSelection
invertNodeSelection	invertNodeSelection
invertNodeSelection,CytoscapeWindowClass-method	invertNodeSelection
layoutNetwork	layoutNetwork
layoutNetwork,CytoscapeWindowClass-method	layoutNetwork
lockNodeDimensions	lockNodeDimensions
lockNodeDimensions,CytoscapeConnectionClass-method	lockNodeDimensions
makeRandomGraph	makeRandomGraph
makeSimpleGraph	makeSimpleGraph
noa	noa
noa.names	noa.names
ping	ping
ping,CytoscapeConnectionClass-method	ping
pluginVersion	pluginVersion
pluginVersion,CytoscapeConnectionClass-method	pluginVersion
predictTimeToDisplayGraph	predictTimeToDisplayGraph
predictTimeToDisplayGraph,CytoscapeWindowClass-method	predictTimeToDisplayGraph
raiseWindow	raiseWindow
raiseWindow,CytoscapeConnectionClass-method	raiseWindow
redraw	redraw
redraw,CytoscapeWindowClass-method	redraw
restoreLayout	restoreLayout
restoreLayout,CytoscapeWindowClass-method	restoreLayout
saveImage	saveImage
saveImage,CytoscapeWindowClass-method	saveImage
saveLayout	saveLayout
saveLayout,CytoscapeWindowClass-method	saveLayout
saveNetwork	saveNetwork
saveNetwork,CytoscapeWindowClass-method	saveNetwork
selectEdges	selectEdges
selectEdges,CytoscapeWindowClass-method	selectEdges
selectFirstNeighborsOfSelectedNodes	selectFirstNeighborsOfSelectedNodes
selectFirstNeighborsOfSelectedNodes,CytoscapeWindowClass-method	selectFirstNeighborsOfSelectedNodes
selectNodes	selectNodes
selectNodes,CytoscapeWindowClass-method	selectNodes
sendEdges	sendEdges
sendEdges,CytoscapeWindowClass-method	sendEdges
sendNodes	sendNodes
sendNodes,CytoscapeWindowClass-method	sendNodes
setCenter	setCenter
setCenter,CytoscapeWindowClass-method	setCenter
setDefaultBackgroundColor	setDefaultBackgroundColor
setDefaultBackgroundColor,CytoscapeConnectionClass-method	setDefaultBackgroundColor
setDefaultEdgeColor	setDefaultEdgeColor
setDefaultEdgeColor,CytoscapeConnectionClass-method	setDefaultEdgeColor
setDefaultEdgeFontSize	setDefaultEdgeFontSize
setDefaultEdgeFontSize,CytoscapeConnectionClass-method	setDefaultEdgeFontSize
setDefaultEdgeLineWidth	setDefaultEdgeLineWidth
setDefaultEdgeLineWidth,CytoscapeConnectionClass-method	setDefaultEdgeLineWidth
setDefaultEdgeReverseSelectionColor	setDefaultEdgeReverseSelectionColor
setDefaultEdgeReverseSelectionColor,CytoscapeConnectionClass-method	setDefaultEdgeReverseSelectionColor
setDefaultEdgeSelectionColor	setDefaultEdgeSelectionColor
setDefaultEdgeSelectionColor,CytoscapeConnectionClass-method	setDefaultEdgeSelectionColor
setDefaultEdgeSourceArrowColor	setDefaultEdgeSourceArrowColor
setDefaultEdgeSourceArrowColor,CytoscapeConnectionClass-method	setDefaultEdgeSourceArrowColor
setDefaultEdgeTargetArrowColor	setDefaultEdgeTargetArrowColor
setDefaultEdgeTargetArrowColor,CytoscapeConnectionClass-method	setDefaultEdgeTargetArrowColor
setDefaultNodeBorderColor	setDefaultNodeBorderColor
setDefaultNodeBorderColor,CytoscapeConnectionClass-method	setDefaultNodeBorderColor
setDefaultNodeBorderWidth	setDefaultNodeBorderWidth
setDefaultNodeBorderWidth,CytoscapeConnectionClass-method	setDefaultNodeBorderWidth
setDefaultNodeColor	setDefaultNodeColor
setDefaultNodeColor,CytoscapeConnectionClass-method	setDefaultNodeColor
setDefaultNodeFontSize	setDefaultNodeFontSize
setDefaultNodeFontSize,CytoscapeConnectionClass-method	setDefaultNodeFontSize
setDefaultNodeLabelColor	setDefaultNodeLabelColor
setDefaultNodeLabelColor,CytoscapeConnectionClass-method	setDefaultNodeLabelColor
setDefaultNodeReverseSelectionColor	setDefaultNodeReverseSelectionColor
setDefaultNodeReverseSelectionColor,CytoscapeConnectionClass-method	setDefaultNodeReverseSelectionColor
setDefaultNodeSelectionColor	setDefaultNodeSelectionColor
setDefaultNodeSelectionColor,CytoscapeConnectionClass-method	setDefaultNodeSelectionColor
setDefaultNodeShape	setDefaultNodeShape
setDefaultNodeShape,CytoscapeConnectionClass-method	setDefaultNodeShape
setDefaultNodeSize	setDefaultNodeSize
setDefaultNodeSize,CytoscapeConnectionClass-method	setDefaultNodeSize
setEdgeAttributes	setEdgeAttributes
setEdgeAttributes,CytoscapeWindowClass-method	setEdgeAttributes
setEdgeAttributesDirect	setEdgeAttributesDirect
setEdgeAttributesDirect,CytoscapeWindowClass-method	setEdgeAttributesDirect
setEdgeColorDirect	setEdgeColorDirect
setEdgeColorDirect,CytoscapeWindowClass-method	setEdgeColorDirect
setEdgeColorRule	setEdgeColorRule
setEdgeColorRule,CytoscapeWindowClass-method	setEdgeColorRule
setEdgeFontSizeDirect	setEdgeFontSizeDirect
setEdgeFontSizeDirect,CytoscapeWindowClass-method	setEdgeFontSizeDirect
setEdgeLabelColorDirect	setEdgeLabelColorDirect
setEdgeLabelColorDirect,CytoscapeWindowClass-method	setEdgeLabelColorDirect
setEdgeLabelDirect	setEdgeLabelDirect
setEdgeLabelDirect,CytoscapeWindowClass-method	setEdgeLabelDirect
setEdgeLabelOpacityDirect	setEdgeLabelOpacityDirect
setEdgeLabelOpacityDirect,CytoscapeWindowClass-method	setEdgeLabelOpacityDirect
setEdgeLabelRule	setEdgeLabelRule
setEdgeLabelRule,CytoscapeWindowClass-method	setEdgeLabelRule
setEdgeLineStyleDirect	setEdgeLineStyleDirect
setEdgeLineStyleDirect,CytoscapeWindowClass-method	setEdgeLineStyleDirect
setEdgeLineStyleRule	setEdgeLineStyleRule
setEdgeLineStyleRule,CytoscapeWindowClass-method	setEdgeLineStyleRule
setEdgeLineWidthDirect	setEdgeLineWidthDirect
setEdgeLineWidthDirect,CytoscapeWindowClass-method	setEdgeLineWidthDirect
setEdgeLineWidthRule	setEdgeLineWidthRule
setEdgeLineWidthRule,CytoscapeWindowClass-method	setEdgeLineWidthRule
setEdgeOpacityDirect	setEdgeOpacityDirect
setEdgeOpacityDirect,CytoscapeWindowClass-method	setEdgeOpacityDirect
setEdgeOpacityRule	setEdgeOpacityRule
setEdgeOpacityRule,CytoscapeWindowClass-method	setEdgeOpacityRule
setEdgeSourceArrowColorDirect	setEdgeSourceArrowColorDirect
setEdgeSourceArrowColorDirect,CytoscapeWindowClass-method	setEdgeSourceArrowColorDirect
setEdgeSourceArrowColorRule	setEdgeSourceArrowColorRule
setEdgeSourceArrowColorRule,CytoscapeWindowClass-method	setEdgeSourceArrowColorRule
setEdgeSourceArrowOpacityDirect	setEdgeSourceArrowOpacityDirect
setEdgeSourceArrowOpacityDirect,CytoscapeWindowClass-method	setEdgeSourceArrowOpacityDirect
setEdgeSourceArrowRule	setEdgeSourceArrowRule
setEdgeSourceArrowRule,CytoscapeWindowClass-method	setEdgeSourceArrowRule
setEdgeSourceArrowShapeDirect	setEdgeSourceArrowShapeDirect
setEdgeSourceArrowShapeDirect,CytoscapeWindowClass-method	setEdgeSourceArrowShapeDirect
setEdgeTargetArrowColorDirect	setEdgeTargetArrowColorDirect
setEdgeTargetArrowColorDirect,CytoscapeWindowClass-method	setEdgeTargetArrowColorDirect
setEdgeTargetArrowColorRule	setEdgeTargetArrowColorRule
setEdgeTargetArrowColorRule,CytoscapeWindowClass-method	setEdgeTargetArrowColorRule
setEdgeTargetArrowOpacityDirect	setEdgeTargetArrowOpacityDirect
setEdgeTargetArrowOpacityDirect,CytoscapeWindowClass-method	setEdgeTargetArrowOpacityDirect
setEdgeTargetArrowRule	setEdgeTargetArrowRule
setEdgeTargetArrowRule,CytoscapeWindowClass-method	setEdgeTargetArrowRule
setEdgeTargetArrowShapeDirect	setEdgeTargetArrowShapeDirect
setEdgeTargetArrowShapeDirect,CytoscapeWindowClass-method	setEdgeTargetArrowShapeDirect
setEdgeTooltipDirect	setEdgeTooltipDirect
setEdgeTooltipDirect,CytoscapeWindowClass-method	setEdgeTooltipDirect
setEdgeTooltipRule	setEdgeTooltipRule
setEdgeTooltipRule,CytoscapeWindowClass-method	setEdgeTooltipRule
setGraph	setGraph
setGraph,CytoscapeWindowClass-method	setGraph
setLayoutProperties	setLayoutProperties
setLayoutProperties,CytoscapeConnectionClass-method	setLayoutProperties
setNodeAttributes	setNodeAttributes
setNodeAttributes,CytoscapeWindowClass-method	setNodeAttributes
setNodeAttributesDirect	setNodeAttributesDirect
setNodeAttributesDirect,CytoscapeWindowClass-method	setNodeAttributesDirect
setNodeBorderColorDirect	setNodeBorderColorDirect
setNodeBorderColorDirect,CytoscapeWindowClass-method	setNodeBorderColorDirect
setNodeBorderColorRule	setNodeBorderColorRule
setNodeBorderColorRule,CytoscapeWindowClass-method	setNodeBorderColorRule
setNodeBorderOpacityDirect	setNodeBorderOpacityDirect
setNodeBorderOpacityDirect,CytoscapeWindowClass-method	setNodeBorderOpacityDirect
setNodeBorderWidthDirect	setNodeBorderWidthDirect
setNodeBorderWidthDirect,CytoscapeWindowClass-method	setNodeBorderWidthDirect
setNodeBorderWidthRule	setNodeBorderWidthRule
setNodeBorderWidthRule,CytoscapeWindowClass-method	setNodeBorderWidthRule
setNodeColorDirect	setNodeColorDirect
setNodeColorDirect,CytoscapeWindowClass-method	setNodeColorDirect
setNodeColorRule	setNodeColorRule
setNodeColorRule,CytoscapeWindowClass-method	setNodeColorRule
setNodeFillOpacityDirect	setNodeFillOpacityDirect
setNodeFillOpacityDirect,CytoscapeWindowClass-method	setNodeFillOpacityDirect
setNodeFontSizeDirect	setNodeFontSizeDirect
setNodeFontSizeDirect,CytoscapeWindowClass-method	setNodeFontSizeDirect
setNodeHeightDirect	setNodeHeightDirect
setNodeHeightDirect,CytoscapeWindowClass-method	setNodeHeightDirect
setNodeImageDirect	setNodeImageDirect
setNodeImageDirect,CytoscapeWindowClass-method	setNodeImageDirect
setNodeLabelColorDirect	setNodeLabelColorDirect
setNodeLabelColorDirect,CytoscapeWindowClass-method	setNodeLabelColorDirect
setNodeLabelDirect	setNodeLabelDirect
setNodeLabelDirect,CytoscapeWindowClass-method	setNodeLabelDirect
setNodeLabelOpacityDirect	setNodeLabelOpacityDirect
setNodeLabelOpacityDirect,CytoscapeWindowClass-method	setNodeLabelOpacityDirect
setNodeLabelRule	setNodeLabelRule
setNodeLabelRule,CytoscapeWindowClass-method	setNodeLabelRule
setNodeOpacityDirect	setNodeOpacityDirect
setNodeOpacityDirect,CytoscapeWindowClass-method	setNodeOpacityDirect
setNodeOpacityRule	setNodeOpacityRule
setNodeOpacityRule,CytoscapeWindowClass-method	setNodeOpacityRule
setNodePosition	setNodePosition
setNodePosition,CytoscapeWindowClass-method	setNodePosition
setNodeShapeDirect	setNodeShapeDirect
setNodeShapeDirect,CytoscapeWindowClass-method	setNodeShapeDirect
setNodeShapeRule	setNodeShapeRule
setNodeShapeRule,CytoscapeWindowClass-method	setNodeShapeRule
setNodeSizeDirect	setNodeSizeDirect
setNodeSizeDirect,CytoscapeWindowClass-method	setNodeSizeDirect
setNodeSizeRule	setNodeSizeRule
setNodeSizeRule,CytoscapeWindowClass-method	setNodeSizeRule
setNodeTooltipRule	setNodeTooltipRule
setNodeTooltipRule,CytoscapeWindowClass-method	setNodeTooltipRule
setNodeWidthDirect	setNodeWidthDirect
setNodeWidthDirect,CytoscapeWindowClass-method	setNodeWidthDirect
setTooltipDismissDelay	setTooltipDismissDelay
setTooltipDismissDelay,CytoscapeConnectionClass-method	setTooltipDismissDelay
setTooltipInitialDelay	setTooltipInitialDelay
setTooltipInitialDelay,CytoscapeConnectionClass-method	setTooltipInitialDelay
setVisualStyle	setVisualStyle
setVisualStyle,CytoscapeConnectionClass-method	setVisualStyle
setWindowSize	setWindowSize
setWindowSize,CytoscapeWindowClass-method	setWindowSize
setZoom	setZoom
setZoom,CytoscapeWindowClass-method	setZoom
sfn	selectFirstNeighborsOfSelectedNodes
sfn,CytoscapeWindowClass-method	selectFirstNeighborsOfSelectedNodes
showGraphicsDetails	showGraphicsDetails
showGraphicsDetails,CytoscapeConnectionClass-method	showGraphicsDetails
unhideAll	unhideAll
unhideAll,CytoscapeWindowClass-method	unhideAll
