# High-quality circular visualization of omics data

## Documentation for package ‘OmicCircos’ version 1.12.0

- DESCRIPTION file.
- User guides, package vignettes and other documentation.
- Code demos. Use demo() to run them.

## Help Pages

circos | draw circular
OmicCircos | OmicCircos package
segAnglePo | generate circular skeleton data from user's mapping data
segAnglePo-method | ~~ Methods for Function 'segAnglePo' ~~
segAnglePo-methods | ~~ Methods for Function 'segAnglePo' ~~
sim.circos | circular data simulation
TCGA.BC.cnv.2k.60 | copy number data of TCGA Breast Cancer
TCGA.BC.fus | TCGA Breast Cancer gene fusion data.
TCGA.BC.gene.exp.2k.60 | TCGA BRCA expression data
TCGA.BC.sample60 | TCGA BRCA Sample names and subtypes
TCGA.BC_Her2_cnv_exp | TCGA BRCA expression and cnv association
TCGA.PAM50_genefu_hg18 | BRCA PAM50 gene list (hg18)
UCSC.chr.colors | chromosome banding colors
UCSC.hg18 | human hg18 circumference coordinates
UCSC.hg18.chr | human hg18 segment data.
UCSC.hg19 | human hg19 circumference coordinates
UCSC.hg19.chr | human hg19 segment data
UCSC.mm10 | mouse mm10 circumference coordinates
UCSC.mm10.chr | mouse mm10 segment data.
UCSC.mm9 | mouse mm9 circumference coordinates
UCSC.mm9.chr | mouse mm9 segment data.