allocatePrecursor2mz	allocatePrecursor2mz
binnedMSP	binnedMSP
binning	binning
cart2Polar	cart2Polar
circosLegend	circosLegend
combine	combine
combine,MSP,MSP-method	combine
combine,MSP-method	combine
compartmentTissue	compartmentTissue
convert2MSP	convert2MSP
convertExampleDF	convertExampleDF
createLink0Matrix	createLink0Matrix
createLinkMatrix	createLinkMatrix
createOrderedSimMat	createOrderedSimMat
createSimilarityMatrix	createSimilarityMatrix
cutLinkMatrix	cutLinkMatrix
cutUniquePreMZ	cutUniquePreMZ
finalMSP	idMSMStoMSP-data
getBegEndIndMSP	getBegEndIndMSP
getLinkMatrixIndices	getLinkMatrixIndices
getMetaboliteClass	getMetaboliteClass
getMetaboliteClass,MSP-method	getMetaboliteClass
getMetaboliteName	getMetaboliteName
getMetaboliteName,MSP-method	getMetaboliteName
getMSP	getMSP
getMSP,MSP-method	getMSP
getName	getName
getName,MSP-method	getName
getPrecursorMZ	getPrecursorMZ
getPrecursorMZ,MSP-method	getPrecursorMZ
getRT	getRT
getRT,MSP-method	getRT
highlight	highlight
idMSMStoMSP-data	idMSMStoMSP-data
length	length-method
length,MSP-method	length-method
minFragCart2Polar	minFragCart2Polar
MSP	MSP
MSP-class	MSP
msp2FunctionalLossesMSP	msp2FunctionalLossesMSP
NDP	NDP
plotCircos	plotCircos
printInformationHover	printInformationHover
sd01_outputXCMS	sd01_outputXCMS
sd02_deconvoluted	sd02_deconvoluted
setMetaboliteClass	setMetaboliteClass
setMetaboliteClass,character,MSP-method	setMetaboliteClass
setMetaboliteName	setMetaboliteName
setMetaboliteName,character,MSP-method	setMetaboliteName
setName	setName
setName,character,MSP-method	setName
shinyCircos	shinyCircos
show	show-method
show,MSP-method	show-method
similarityMat	similarityMat
thresholdLinkMatrix	thresholdLinkMatrix
tissue	tissue
truncateName	truncateName
[	extract-methods
[,MSP,numeric,missing,missing-method	extract-methods
