# Generated by roxygen2: do not edit by hand

S3method(duplicated, GTuples)
S3method(sort, GTuples)
export("tuples<-")
export(GTuples)
export(GTuplesList)
export(IPD)
export(duplicated.GTuples)
export(gtlist)
export(gtuples)
export(size)
export(sort.GTuples)
export(tuples)
exportClasses(GTuples)
exportClasses(GTuplesList)
exportMethods("[<-")
exportMethods("tuples<-")
exportMethods(IPD)
exportMethods(Ops)
exportMethods(as.data.frame)
exportMethods(c)
exportMethods(countOverlaps)
exportMethods(coverage)
exportMethods(disjoin)
exportMethods(disjointBins)
exportMethods(duplicated)
exportMethods(findOverlaps)
exportMethods(flank)
exportMethods(gaps)
exportMethods(granges)
exportMethods(intersect)
exportMethods(is.unsorted)
exportMethods(isDisjoint)
exportMethods(match)
exportMethods(narrow)
exportMethods(order)
exportMethods(pcompare)
exportMethods(pgap)
exportMethods(pintersect)
exportMethods(promoters)
exportMethods(psetdiff)
exportMethods(punion)
exportMethods(range)
exportMethods(reduce)
exportMethods(relistToClass)
exportMethods(resize)
exportMethods(restrict)
exportMethods(selfmatch)
exportMethods(setdiff)
exportMethods(shift)
exportMethods(show)
exportMethods(size)
exportMethods(sort)
exportMethods(tile)
exportMethods(tuples)
exportMethods(union)
import(BiocGenerics)
importClassesFrom(GenomicRanges,GRanges)
importClassesFrom(S4Vectors,DataFrame)
importFrom(GenomicRanges,GRanges)
importFrom(GenomicRanges,GRangesList)
importFrom(IRanges,IRanges)
importFrom(IRanges,PartitioningByEnd)
importFrom(Rcpp,sourceCpp)
importFrom(S4Vectors,DataFrame)
importFrom(S4Vectors,Hits)
importFrom(S4Vectors,List)
importFrom(S4Vectors,Rle)
importFrom(S4Vectors,isSingleNumber)
importFrom(S4Vectors,isSingleNumberOrNA)
importFrom(S4Vectors,isTRUEorFALSE)
importFrom(S4Vectors,selectHits)
importFrom(S4Vectors,selfmatch)
importFrom(S4Vectors,setValidity2)
importFrom(data.table,":=")
importFrom(data.table,.GRP)
importFrom(data.table,.I)
importFrom(data.table,as.data.table)
importFrom(data.table,data.table)
importFrom(data.table,setkeyv)
importFrom(data.table,setorderv)
importFrom(methods,as)
importFrom(methods,callNextMethod)
importFrom(methods,new)
importFrom(methods,setAs)
importFrom(methods,setClass)
importFrom(methods,setClassUnion)
importFrom(methods,setGeneric)
importFrom(methods,setMethod)
importFrom(methods,setReplaceMethod)
importFrom(stats,setNames)
importFrom(utils,globalVariables)
importMethodsFrom(GenomeInfoDb,"seqinfo<-")
importMethodsFrom(GenomeInfoDb,"seqlevels<-")
importMethodsFrom(GenomeInfoDb,"seqnames<-")
importMethodsFrom(GenomeInfoDb,isCircular)
importMethodsFrom(GenomeInfoDb,merge)
importMethodsFrom(GenomeInfoDb,seqinfo)
importMethodsFrom(GenomeInfoDb,seqlengths)
importMethodsFrom(GenomeInfoDb,seqlevels)
importMethodsFrom(GenomeInfoDb,seqnames)
importMethodsFrom(GenomicRanges,granges)
importMethodsFrom(IRanges,"ranges<-")
importMethodsFrom(IRanges,countOverlaps)
importMethodsFrom(IRanges,coverage)
importMethodsFrom(IRanges,disjoin)
importMethodsFrom(IRanges,disjointBins)
importMethodsFrom(IRanges,findOverlaps)
importMethodsFrom(IRanges,flank)
importMethodsFrom(IRanges,gaps)
importMethodsFrom(IRanges,isDisjoint)
importMethodsFrom(IRanges,narrow)
importMethodsFrom(IRanges,pgap)
importMethodsFrom(IRanges,pintersect)
importMethodsFrom(IRanges,promoters)
importMethodsFrom(IRanges,psetdiff)
importMethodsFrom(IRanges,punion)
importMethodsFrom(IRanges,ranges)
importMethodsFrom(IRanges,reduce)
importMethodsFrom(IRanges,relistToClass)
importMethodsFrom(IRanges,resize)
importMethodsFrom(IRanges,restrict)
importMethodsFrom(IRanges,shift)
importMethodsFrom(IRanges,tile)
importMethodsFrom(IRanges,update)
importMethodsFrom(IRanges,which)
importMethodsFrom(S4Vectors,"%in%")
importMethodsFrom(S4Vectors,"mcols<-")
importMethodsFrom(S4Vectors,as.factor)
importMethodsFrom(S4Vectors,extractROWS)
importMethodsFrom(S4Vectors,from)
importMethodsFrom(S4Vectors,mcols)
importMethodsFrom(S4Vectors,pcompare)
importMethodsFrom(S4Vectors,replaceROWS)
importMethodsFrom(S4Vectors,showAsCell)
importMethodsFrom(S4Vectors,split)
useDynLib(GenomicTuples, .registration = TRUE)
