Package: DEGreport
Version: 1.10.1
Date: 2017-02-03
Type: Package
Title: Report of DEG analysis
Description: Creation of a HTML report of differential expression
    analyses of count data. It integrates some of the code
    mentioned in DESeq2 and edgeR vignettes, and report a ranked
    list of genes according to the fold changes mean and
    variability for each selected gene.
biocViews: DifferentialExpression, Visualization, RNASeq,
        ReportWriting, GeneExpression
Suggests: biomaRt, RUnit, BiocStyle, BiocGenerics, org.Hs.eg.db,
        DESeq2, AnnotationDbi, BiocParallel
Depends: R (>= 3.2.0), quantreg
Imports: utils, methods, ggplot2, Nozzle.R1, coda, edgeR, cluster,
        logging, dplyr, tidyr, reshape, pheatmap, grid, gridExtra,
        knitr, grDevices, stats
Author: Lorena Pantano
Maintainer: Lorena Pantano <lorena.pantano@gmail.com>
License: MIT + file LICENSE
VignetteBuilder: knitr
RoxygenNote: 5.0.1
NeedsCompilation: no
Packaged: 2017-02-05 00:49:17 UTC; biocbuild
Built: R 3.3.2; ; 2017-02-05 02:55:25 UTC; windows
