562337bb46e3a64153ebf503bf2599e3 *CITATION
5e59aaad68aabf19a955366ab54ae572 *DESCRIPTION
47b982ab8b5338b81d4a6e931dccd8e5 *INDEX
05b1ba93d112a60fe5278a470c0130a6 *Meta/Rd.rds
b589b53773a73ba99d3bbbc6f15ee946 *Meta/hsearch.rds
433e4398cabb5927b130dfc7187260f2 *Meta/links.rds
fba39a09a60988a630e6b74794bc4945 *Meta/nsInfo.rds
17e800a14952b7105f48d5ff893d8f29 *Meta/package.rds
7989d4c8270e41a80ccb3d993edbae6d *Meta/vignette.rds
b32a715fece9d0d0bb880ae1359c93da *NAMESPACE
7c94e345b80d4eac2181c928b71e5ff3 *NEWS
ebf0fc819595d631b8bf280c4b049940 *R/CRISPRseek
ddad03cf75f471d890c872c20f24db39 *R/CRISPRseek.rdb
3a7ce18e3ff540392a50e3e75a57d131 *R/CRISPRseek.rdx
65e7f71085adce0a55664b1e9c62fbed *doc/CRISPRseek.R
8975bc7035900949abde1c27ba074159 *doc/CRISPRseek.Rnw
0bde225fc6db98122ec60545468bc46a *doc/CRISPRseek.pdf
67f99e108af1d5f08ca5dc71409d465b *doc/index.html
40ca0fe9fcc50f22cf2eab911a0e162a *extdata/DoenchNBT2014.csv
3d9c1d814907b44782136daae9e164a7 *extdata/ForTestinguniqueREs.RData
27a8747ae646f5ee6d63b6608df2f306 *extdata/NEBenzymes.fa
75351020e8e1357af78ca004f1c93349 *extdata/NatureBiot2016SuppTable19DoenchRoot.csv
79be1f4fb1d484990d4a9353ef1a54a3 *extdata/RIPK1stop.fa
9e99a4998da29c0001658021a5163246 *extdata/T2.fa
652b596e1a437cd3070bc7afb64c423f *extdata/T2plus100OffTargets.bed
159422761901c39904cc3e89c6912703 *extdata/cpf1.fa
82331a32ca548f165d4309af09b6bb7b *extdata/gRNAProvidedSearch/OfftargetAnalysis.xls
dd28d1d41051ea0336d74e5efb12720b *extdata/gRNAProvidedSearch/REcutDetails.xls
2606d8c2793f3e8724aa0809a93e7b79 *extdata/gRNAProvidedSearch/Summary.xls
793bccad58fe016a62dbd732a880bfbd *extdata/gRNAProvidedSearch/gRNAsCRISPRseek.bed
b2d629c5aa9d1d4222383b3c4f7dfdb8 *extdata/gRNAProvidedSearchNOoffTarget/OfftargetAnalysis.xls
5ebcea0b6def026771d999eb235f474d *extdata/gRNAProvidedSearchNOoffTarget/Summary.xls
bb2c872180d615bc2a706c194fa650d6 *extdata/gRNAProvidedSearchNOoffTargetNoAnn/OfftargetAnalysis.xls
c5f4eb0ed8cb0f0236bebf312902dc49 *extdata/gRNAProvidedSearchNOoffTargetNoAnn/REcutDetails.xls
5ebcea0b6def026771d999eb235f474d *extdata/gRNAProvidedSearchNOoffTargetNoAnn/Summary.xls
087b72b30748ac17d7ce19ae7c679028 *extdata/gRNAProvidedSearchNOoffTargetNoAnn/gRNAsCRISPRseek.bed
e331ca983b0eca0d6ed1f8d9eb811534 *extdata/hits.txt
59f3774a3bd7f3c0493dd3844bc81e12 *extdata/inputseq.fa
98587f5579498517926268823b12bdad *extdata/pairedSearch/withRE/OfftargetAnalysis.xls
970bdd23900722433bea7f9fd0187f54 *extdata/pairedSearch/withRE/REcutDetails.xls
c0913d954b5da5adae22613f6d877b6d *extdata/pairedSearch/withRE/Summary.xls
f9f2bd5d46ff60d6c2c57a0bb36b25f7 *extdata/pairedSearch/withRE/pairedgRNAs.xls
98587f5579498517926268823b12bdad *extdata/pairedSearch/withoutRE/OfftargetAnalysis.xls
970bdd23900722433bea7f9fd0187f54 *extdata/pairedSearch/withoutRE/REcutDetails.xls
c0913d954b5da5adae22613f6d877b6d *extdata/pairedSearch/withoutRE/Summary.xls
f9f2bd5d46ff60d6c2c57a0bb36b25f7 *extdata/pairedSearch/withoutRE/pairedgRNAs.xls
d43302aca1ab1102d4eb796d49c8902a *extdata/recreateTestResults.R
92c09c9c3cf89a721b3dc843877b896f *extdata/rs362331C.fa
59de9309b8be7aca7ddf7afca89c3226 *extdata/rs362331T.fa
d8bccda7753b4707ad0da330ae62de96 *extdata/seqs2.5prime.RData
e8f54565c93b46466355bf5ac683b870 *extdata/seqs2.RData
0b6031d1b2831c6c7acfc565e06b1fb2 *extdata/seqs2CFD.RData
118462f42f3946779cb25165095f7e30 *extdata/test.bed
79d12e401109aa217909b3ab87ed8837 *extdata/testHsap_GATA1_ex2_gRNA1.fa
c4da56ba994fadff483bf0b92a92abf6 *extdata/testMouse/NOTannotateExon/OfftargetAnalysis.xls
ce6b75c75db53d846168ddbdc2637bc4 *extdata/testMouse/NOTannotateExon/REcutDetails.xls
422d793f13b9d29590546d4d5221b7cd *extdata/testMouse/NOTannotateExon/RIPK1stopallgRNAs.fa
f7bd63bdf943012a0d4bddcecec2947a *extdata/testMouse/NOTannotateExon/Summary.xls
beff7a5dd7d6dcf1ae438ddda3315b46 *extdata/testMouse/NOTannotateExon/mRIPK1stop.gbk
126ee7da5eecc5314847a38964862e3f *extdata/testMouse/NOTannotateExon/pairedgRNAs.xls
f6577ffb0ae0dad60ec9dde501df6f68 *extdata/testMouse/NOorgAnn/OfftargetAnalysis.xls
ce6b75c75db53d846168ddbdc2637bc4 *extdata/testMouse/NOorgAnn/REcutDetails.xls
422d793f13b9d29590546d4d5221b7cd *extdata/testMouse/NOorgAnn/RIPK1stopallgRNAs.fa
f7bd63bdf943012a0d4bddcecec2947a *extdata/testMouse/NOorgAnn/Summary.xls
beff7a5dd7d6dcf1ae438ddda3315b46 *extdata/testMouse/NOorgAnn/mRIPK1stop.gbk
126ee7da5eecc5314847a38964862e3f *extdata/testMouse/NOorgAnn/pairedgRNAs.xls
e58fe279e51179995134f28245e892bf *extdata/testMouse/WithorgAnn/OfftargetAnalysis.xls
ce6b75c75db53d846168ddbdc2637bc4 *extdata/testMouse/WithorgAnn/REcutDetails.xls
422d793f13b9d29590546d4d5221b7cd *extdata/testMouse/WithorgAnn/RIPK1stopallgRNAs.fa
f7bd63bdf943012a0d4bddcecec2947a *extdata/testMouse/WithorgAnn/Summary.xls
beff7a5dd7d6dcf1ae438ddda3315b46 *extdata/testMouse/WithorgAnn/mRIPK1stop.gbk
126ee7da5eecc5314847a38964862e3f *extdata/testMouse/WithorgAnn/pairedgRNAs.xls
dc0f013bb098204d91711520a7520574 *extdata/testspeed.fa
ca191043e8dce8b421a3e95094b4b41c *extdata/tobi2.fa
b33bd6317003f10a22b09861b79131bb *extdata/unPairedSearch/withRE/OfftargetAnalysis.xls
66bc697673b565f7cb277fefb811567f *extdata/unPairedSearch/withRE/REcutDetails.xls
04d3f76489c7b06e272df62b544e428f *extdata/unPairedSearch/withRE/Summary.xls
f9f2bd5d46ff60d6c2c57a0bb36b25f7 *extdata/unPairedSearch/withRE/pairedgRNAs.xls
a6937793a5bcd362c675962c28d72945 *extdata/unPairedSearch/withoutRE/OfftargetAnalysis.xls
66bc697673b565f7cb277fefb811567f *extdata/unPairedSearch/withoutRE/REcutDetails.xls
18181139bd8a207769122a600fedc224 *extdata/unPairedSearch/withoutRE/Summary.xls
f9f2bd5d46ff60d6c2c57a0bb36b25f7 *extdata/unPairedSearch/withoutRE/pairedgRNAs.xls
a66a960a73fed17af5a481df2af4e287 *help/AnIndex
936b9f37f8bbeaa847724f87d3e5df7e *help/CRISPRseek.rdb
31c013bb2c4944f8b11e36fdcf688ac8 *help/CRISPRseek.rdx
e69e1c0d0c2a595ff6be3ff78ce43601 *help/aliases.rds
5685030d134d788efe568137d1fca283 *help/paths.rds
6a0faaae4b175859e74aa67b83c63998 *html/00Index.html
b6763e6916890c631fdc3f2643803b1a *html/R.css
2ccb3db8ef3b36a116616cbfa2681fab *unitTests/test_compare2Sequences.R
29d3d38d8716ca4a3f428b7648d42163 *unitTests/test_gRNAprovidedCompare2Seqs.R
f165542425ebd27669139c48c300c3e8 *unitTests/test_gRNAprovidedNoPAM.R
25fb37ac30f2eb504252c0ea6836a389 *unitTests/test_getOfftargetScore2.R
19aa99cf3e398fe4d640c6270b5c7654 *unitTests/test_mouse_orgAnn_annotateExon.R
c24599a9c3be55b329e1578b9d7ef78e *unitTests/test_offTargetAnalysis.R
