# Generated by roxygen2: do not edit by hand

export("burnin<-")
export("hyperParams<-")
export("iter<-")
export("k<-")
export("mcmcParams<-")
export("modes<-")
export("nStarts<-")
export()
export(BatchModel)
export(DensityModel)
export(Hyperparameters)
export(HyperparametersBatch)
export(HyperparametersMarginal)
export(MarginalModel)
export(McmcParams)
export(batch)
export(bic)
export(burnin)
export(chains)
export(chromosome)
export(clusters)
export(collapseBatch)
export(consensusCNP)
export(downSampleEachBatch)
export(downsample)
export(eta.0)
export(hyperParams)
export(iter)
export(k)
export(labelSwitching)
export(logBayesFactor)
export(logPrior)
export(log_lik)
export(m2.0)
export(map)
export(mapCnProbability)
export(marginalLikelihood)
export(mcmcParams)
export(modes)
export(mu)
export(muMean)
export(muc)
export(nStarts)
export(nu.0)
export(oned)
export(p)
export(pic)
export(plot)
export(posteriorSimulation)
export(posterior_cases)
export(probz)
export(qInverseTau2)
export(saveBatch)
export(sigma)
export(sigma2)
export(sigma2.0)
export(sigmac)
export(simulateBatchData)
export(simulateData)
export(tau)
export(tau2)
export(tauMean)
export(tauc)
export(theta)
export(thin)
export(tracePlot)
export(y)
export(z)
export(zFreq)
exportClasses(DensityBatchModel)
exportClasses(DensityModel)
exportMethods(labelSwitching)
exportMethods(mu)
import(BiocGenerics)
import(GenomicRanges)
import(IRanges)
import(S4Vectors)
import(SummarizedExperiment)
import(methods)
importFrom(GenomeInfoDb,"seqinfo<-")
importFrom(GenomeInfoDb,"seqlevels<-")
importFrom(GenomeInfoDb,seqinfo)
importFrom(GenomeInfoDb,seqlevels)
importFrom(GenomeInfoDb,seqnames)
importFrom(RColorBrewer,brewer.pal)
importFrom(Rcpp,evalCpp)
importFrom(S4Vectors,DataFrame)
importFrom(S4Vectors,Rle)
importFrom(S4Vectors,SimpleList)
importFrom(coda,effectiveSize)
importFrom(combinat,permn)
importFrom(graphics,lines)
importFrom(graphics,par)
importFrom(gtools,ddirichlet)
importFrom(gtools,rdirichlet)
importFrom(matrixStats,colMaxs)
importFrom(matrixStats,colMedians)
importFrom(matrixStats,colSds)
importFrom(matrixStats,rowCumsums)
importFrom(matrixStats,rowProds)
importFrom(stats,dnorm)
importFrom(stats,kmeans)
importFrom(stats,ks.test)
importFrom(stats,plot.ts)
importFrom(stats,qgamma)
importFrom(stats,rbeta)
importFrom(stats,rgamma)
importFrom(stats,rgeom)
importFrom(stats,rnorm)
importFrom(stats,runif)
importFrom(stats,setNames)
useDynLib(CNPBayes)
