# BEAT - BS-Seq Epimutation Analysis Toolkit

## Documentation for package ‘BEAT’ version 1.12.0

- DESCRIPTION file.
- User guides, package vignettes and other documentation.

## Help Pages

BEAT-package | BEAT - BS-Seq Epimutation Analysis Toolkit
BEAT | BEAT - BS-Seq Epimutation Analysis Toolkit
epimutation_calls | Returns epimutation rates and sites.
generate_results | Computes model methylation states for genomic region counts of a list of samples.
makeParams | Creates a parameter object of arguments to be used with other BEAT functions.
positions | Sample dataset of CpG positions for a single cell BS-seq sample
positions.reference | Sample dataset of CpG positions for a reference BS-Seq sample
positions_to_regions | Converts methylation counts for single genomic positions to counts for genomic regions