Package: SPLINTER
Type: Package
Title: Splice Interpreter Of Transcripts
Version: 1.0.0
Date: 2016-10-07
Authors@R: c(person("Diana", "Low", role = c("aut", "cre"),email =
        "dlow@imcb.a-star.edu.sg"))
Author: Diana Low
Maintainer: Diana Low <dlow@imcb.a-star.edu.sg>
Description: SPLINTER provides tools to analyze alternative splicing
        sites, interpret outcomes based on sequence information, select
        and design primers for site validiation and give visual
        representation of the event to guide downstream experiments.
License: GPL-2
LazyData: TRUE
Depends: R (>= 3.3.0), grDevices, stats
Imports: graphics, ggplot2, seqLogo, Biostrings, biomaRt,
        GenomicAlignments, GenomicRanges, GenomicFeatures, Gviz,
        IRanges, S4Vectors, GenomeInfoDb, utils, plyr,
        BSgenome.Mmusculus.UCSC.mm9
biocViews: GeneExpression, RNASeq, Visualization, AlternativeSplicing
Collate: primerpcr.R main_splinter.R
RoxygenNote: 5.0.1
VignetteBuilder: knitr
Suggests: BiocStyle, knitr, rmarkdown
NeedsCompilation: no
Packaged: 2016-10-18 04:57:01 UTC; biocbuild
Built: R 3.3.1; ; 2016-10-18 19:06:26 UTC; unix
