Package: rqt
Type: Package
Title: rqt: utilities for gene-level meta-analysis
Version: 1.22.0
Author: I. Y. Zhbannikov, K. G. Arbeev, A. I. Yashin.
Maintainer: Ilya Y. Zhbannikov <ilya.zhbannikov@duke.edu>
Description: Despite the recent advances of modern GWAS methods, it
        still remains an important problem of addressing calculation an
        effect size and corresponding p-value for the whole gene rather
        than for single variant. The R- package rqt offers gene-level
        GWAS meta-analysis. For more information, see: "Gene-set
        association tests for next-generation sequencing data" by Lee
        et al (2016), Bioinformatics, 32(17), i611-i619,
        <doi:10.1093/bioinformatics/btw429>.
URL: https://github.com/izhbannikov/rqt
BugReports: https://github.com/izhbannikov/rqt/issues
License: GPL
RoxygenNote: 6.0.1
Suggests: BiocStyle, knitr, rmarkdown
VignetteBuilder: knitr
Imports:
        stats,Matrix,ropls,methods,car,RUnit,metap,CompQuadForm,glmnet,utils,pls
Depends: R (>= 3.4), SummarizedExperiment
Encoding: UTF-8
biocViews: GenomeWideAssociation, Regression, Survival,
        PrincipalComponent, StatisticalMethod, Sequencing
git_url: https://git.bioconductor.org/packages/rqt
git_branch: RELEASE_3_15
git_last_commit: c4e0d3a
git_last_commit_date: 2022-04-26
Date/Publication: 2022-04-26
NeedsCompilation: no
Packaged: 2022-04-27 00:55:38 UTC; biocbuild
Built: R 4.2.0; ; 2022-04-27 10:01:58 UTC; windows
