GSAheatmap              Heatmap of top significant gene sets
GSAsummaryTable         Gene set analysis summary table
consensusHeatmap        Heatmap of top consensus gene sets
consensusScores         Top consensus gene sets and boxplot
diffExp                 Perform differential expression analysis
exploreGSAres           Explore GSA results
extractFactors          Extracts 'ArrayData' factors
geneSetSummary          Gene set summary
gsa_input               Random input data for gene set analysis
gsa_results             Gene set analysis result data
loadGSC                 Load a gene set collection
loadMAdata              Load and preprocess microarray data
networkPlot             Gene set network plot
networkPlot2            Gene set network plot
piano-package           Piano - Platform for Integrative ANalysis of
                        Omics data
polarPlot               Polar plot
runGSA                  Gene set analysis
runGSAhyper             Gene set analysis with Fisher's exact test
runQC                   Run quality control
writeFilesForKiwi       Write files for Kiwi
