Package: biomvRCNS
Type: Package
Title: Copy Number study and Segmentation for multivariate biological
        data
Version: 1.36.0
Date: 2021-11-20
Author: Yang Du
Maintainer: Yang Du <tooyoung@gmail.com>
Description: In this package, a Hidden Semi Markov Model (HSMM) and one
        homogeneous segmentation model are designed and implemented for
        segmentation genomic data, with the aim of assisting in
        transcripts detection using high throughput technology like
        RNA-seq or tiling array, and copy number analysis using aCGH or
        sequencing.
License: GPL (>= 2)
LazyLoad: yes
Imports: methods, mvtnorm
Depends: R (>= 3.5.0), IRanges, GenomicRanges, Gviz
Suggests: cluster, parallel, GenomicFeatures, dynamicTreeCut,
        Rsamtools, TxDb.Hsapiens.UCSC.hg19.knownGene
biocViews: aCGH, CopyNumberVariation, Microarray, Sequencing,
        Visualization, Genetics
git_url: https://git.bioconductor.org/packages/biomvRCNS
git_branch: RELEASE_3_15
git_last_commit: 0e9de50
git_last_commit_date: 2022-04-26
Date/Publication: 2022-04-26
NeedsCompilation: yes
Packaged: 2022-04-26 21:37:52 UTC; biocbuild
Built: R 4.2.0; x86_64-w64-mingw32; 2022-04-27 09:13:04 UTC; windows
ExperimentalWindowsRuntime: ucrt
Archs: x64
