.rederpost              This function implements an RPC protocol for
                        RedeR.
Carroll2006             Pre-processed dataset for RedeR case study.
RedPort                 The constructor for the RedPort class.
RedPort-class           Class "RedPort"
RedeR-package           RedeR: bridging the gap between network
                        analysis and visualization.
addEdgeBetweenContainers
                        Add edges between containers.
addEdges                Add edges to RedeR graphs.
addGraph                Display 'igraph' objects in the RedeR
                        application.
addLegend.color         Add graph legends to RedeR application.
addNodes                Add nodes to RedeR graphs.
addSeries               Add series to RedeR application.
addSubgraph             Add subgraphs to RedeR application.
addSubgraph.list        Add a list of subgraphs to RedeR application.
att.setv                Add, map, and set edge and vertex attributes to
                        the RedeR application.
calld                   Call RedeR app from R.
cea                     Co-expression analysis.
deSelectEdges           Unmark selected edges.
deSelectGraph           Unmark selected graph objects.
deSelectNodes           Unmark selected nodes.
deleteEdges             Remove edges from RedeR graphs.
deleteNodes             Remove nodes from RedeR graphs.
deleteSelectedEdges     Delete selected edges in RedeR graphs.
deleteSelectedNodes     Delete selected nodes in RedeR graphs.
duplicateGraph          Duplicate graphs in RedeR application.
exitd                   Exit RedeR R-to-Java interface.
getContainerComponets   Get container components.
getEdgeIDs              Get edge IDs.
getEdges                Get edges.
getGraph                Get RedeR graph.
getNodeIDs              Get node IDs.
getNodes                Get nodes.
getSourceEdgeIDs        Get source-edge IDs.
getTargetEdgeIDs        Get target-edge IDs.
gtoy.rm                 Random graphs and modules.
isRelaxActive           Inquires about RedeR current state.
mergeNodes              Merge nodes.
mergeOutEdges           Merge out-edges between connected containers
                        and transfers edges from nodes to containers.
nestNodes               Nest nodes to containers.
nesthc                  Nest hclust objects to containers.
ping                    Test RedeR R-to-Java interface.
relax                   relax
resetd                  Reset RedeR app.
selectAllEdges          Select all edges.
selectAllNodes          selectAllNodes
selectEdges             selectEdges
selectGraph             Select graph.
selectNodes             Select nodes.
setArrowDirection       Set arrow direction.
subg                    Subgraph of a graph.
updateContainerSize     Update container size.
updateCoordXY           Update node coordinates.
updateGraph             Update RedeR graphs.
version                 Version
