Package: HPAStainR
Title: Queries the Human Protein Atlas Staining Data for Multiple
        Proteins and Genes
Version: 1.6.0
Authors@R: person(given = "Tim O.",
           family = "Nieuwenhuis",
           role = c("aut", "cre"),
           email = "tnieuwe1@jhmi.edu",
           comment = c(ORCID = "0000-0002-1995-3317"))
Description: This package is built around the HPAStainR function. The purpose of
    the HPAStainR function is to query the visual staining data in the Human
    Protein Atlas to return a table of staining ranked cell types. The function
    also has multiple arguments to personalize to output as well to include
    cancer data, csv readable names, modify the confidence levels of the results
    and more. The other functions exist exclusively to easily acquire the data
    required to run HPAStainR.
License: Artistic-2.0
Encoding: UTF-8
Depends: R (>= 4.1.0), dplyr, tidyr
Imports: utils, stats, scales, stringr, tibble, shiny, data.table
Suggests: knitr, BiocManager, qpdf, hpar, testthat, rmarkdown
RoxygenNote: 7.1.1
SystemRequirements: 4GB of RAM
biocViews: GeneExpression, GeneSetEnrichment
BugReports: https://github.com/tnieuwe/HPAstainR
VignetteBuilder: knitr
git_url: https://git.bioconductor.org/packages/HPAStainR
git_branch: RELEASE_3_15
git_last_commit: 7d68438
git_last_commit_date: 2022-04-26
Date/Publication: 2022-04-26
NeedsCompilation: no
Packaged: 2022-04-26 23:16:27 UTC; biocbuild
Author: Tim O. Nieuwenhuis [aut, cre] (<https://orcid.org/0000-0002-1995-3317>)
Maintainer: Tim O. Nieuwenhuis <tnieuwe1@jhmi.edu>
Built: R 4.2.0; ; 2022-04-27 09:36:40 UTC; windows
