GENESIS-package	GENESIS-package
admixMap	admixMap
admixMapMM	defunct
assocTestAggregate	assocTestAggregate
assocTestAggregate,GenotypeIterator-method	assocTestAggregate
assocTestAggregate,SeqVarIterator-method	assocTestAggregate
assocTestAggregate-methods	assocTestAggregate
assocTestMM	defunct
assocTestSeq	defunct
assocTestSeqWindow	defunct
assocTestSingle	assocTestSingle
assocTestSingle,GenotypeIterator-method	assocTestSingle
assocTestSingle,SeqVarIterator-method	assocTestSingle
assocTestSingle-methods	assocTestSingle
calcISAFBeta	pcrelate
calcScore	fitNullModel
computeVSIF	computeVSIF
computeVSIFNullModel	computeVSIF
correctK0	pcrelate
correctK2	pcrelate
correctKin	pcrelate
effectAllele	effectAllele
effectAllele,GenotypeData-method	effectAllele
effectAllele,SeqVarGDSClass-method	effectAllele
effectAllele-methods	effectAllele
fitNullMM	defunct
fitNullModel	fitNullModel
fitNullModel,AnnotatedDataFrame-method	fitNullModel
fitNullModel,data.frame-method	fitNullModel
fitNullModel,GenotypeData-method	fitNullModel
fitNullModel,ScanAnnotationDataFrame-method	fitNullModel
fitNullModel,SeqVarData-method	fitNullModel
fitNullModel-methods	fitNullModel
fitNullModelFastScore	fitNullModel
fitNullModelFastScore,SeqVarData-method	fitNullModel
fitNullModelFastScore-methods	fitNullModel
fitNullReg	defunct
GENESIS	GENESIS-package
GENESIS-defunct	defunct
HapMap_ASW_MXL_KINGmat	HapMap_ASW_MXL_KINGmat
isNullModelFastScore	fitNullModel
isNullModelSmall	fitNullModel
jointScoreTest	jointScoreTest
kin2gds	kin2gds
king2mat	defunct
kingToMatrix	kingToMatrix
kingToMatrix,character-method	kingToMatrix
kingToMatrix,snpgdsIBDClass-method	kingToMatrix
makeSparseMatrix	makeSparseMatrix
makeSparseMatrix,data.frame-method	makeSparseMatrix
makeSparseMatrix,data.table-method	makeSparseMatrix
makeSparseMatrix,Matrix-method	makeSparseMatrix
makeSparseMatrix,matrix-method	makeSparseMatrix
makeSparseMatrix-methods	makeSparseMatrix
mat2gds	kin2gds
nullModelFastScore	fitNullModel
nullModelInvNorm	fitNullModel
nullModelSmall	fitNullModel
pcair	pcair
pcair,gds.class-method	pcair
pcair,GdsGenotypeReader-method	pcair
pcair,GenotypeData-method	pcair
pcair,MatrixGenotypeReader-method	pcair
pcair,SeqVarGDSClass-method	pcair
pcair,SNPGDSFileClass-method	pcair
pcair-methods	pcair
pcairPartition	pcairPartition
pcrelate	pcrelate
pcrelate,GenotypeData-method	defunct
pcrelate,GenotypeIterator-method	pcrelate
pcrelate,SeqVarData-method	defunct
pcrelate,SeqVarIterator-method	pcrelate
pcrelateMakeGRM	defunct
pcrelateReadInbreed	defunct
pcrelateReadKinship	defunct
pcrelateSampBlock	pcrelate
pcrelateToMatrix	pcrelateToMatrix
pcrelateToMatrix,pcrelate-method	pcrelateToMatrix
plot.pcair	plot.pcair
print.pcair	print.pcair
print.summary.pcair	print.pcair
samplesGdsOrder	pcrelate
sample_annotation_1KG	sample_annotation_1KG
summary.pcair	print.pcair
varCompCI	varCompCI
