export("SNVtest2","create.mutation.matrix","get.mutation.frequencies","clonEM", "grid.lik" ,"mutation.rem","mutation.proba","SNVtest", "ave.adj.probes","chromosomePlots","clonality.analysis","genomewidePlots","histogramPlot","LOHclonality", "splitChromosomes","ECMtesting","LRtesting3or4tumors")

S3method(print,mutation.proba)

S3method(print,mutation.rem)

importFrom(DNAcopy, CNA)

importFrom(grDevices, dev.interactive, dev.off, pdf)

importFrom(graphics, abline, arrows, axis, hist, lines, mtext, par,
           plot, points, text)

importFrom(stats, density, mad, median, optim, optimize, runif, dlnorm)

 importFrom("utils", "write.table")


  importFrom("utils", "data")

