94bf0121c6a20d29f930b871a4f92eda *CITATION
bd6cba50ce909440065330772a20dfb2 *DESCRIPTION
68bb9ab215ae4b272ec27b23211bae93 *INDEX
bb087882b665fe8e24160a58aedd00ce *LICENSE
ace9355ac1f53de73791907aa42e133e *Meta/Rd.rds
d98f81311d62e71cc51c8d8ac929fd8b *Meta/data.rds
9c6fc9444f1d52dca2f8e75b612d7e36 *Meta/features.rds
1ae78e8d3e23791ca8e3315fe812e17b *Meta/hsearch.rds
83ee177caae678079ccaa40a0858ec95 *Meta/links.rds
669aec2b3d80f7c06a889d832344f043 *Meta/nsInfo.rds
a5f9360980d4eb71234ed659a05ab0a0 *Meta/package.rds
144f82ce6af74684338f0ae26ada0152 *Meta/vignette.rds
529d6739f5d3e673afc9a295d7862ebe *NAMESPACE
fad59674387f98c24c21f8f0359c6381 *NEWS
d6c68f1fe41ced6e98a766a3757313da *R/CNEr
76c6ecc577b5672a3b79bd9501f117d6 *R/CNEr.rdb
d4a4233dace219b845a621dbf065e0ed *R/CNEr.rdx
b9aac139b7de815fc1319d1f33ec7334 *data/CNEDanRer10Hg38.rda
346e1d3e1bac3aefb13b8041ac569810 *data/CNEHg38DanRer10.rda
e19bef8499d96f13c72d3dedef80e64f *data/axisTrack.rda
a2ee4e67ae5ff451b197a823446c1372 *data/cneFinalListDanRer10Hg38.rda
f07a2fbd832ccf6b2510e02770f3f51b *data/cpgIslands.rda
7cafff2d1de75cafd1b12738b210f5fc *data/grangesPairsForDotplot.rda
28f6e0819688ffa970fb265894f8ec30 *data/refGenes.rda
25985dd540127241e49d7c68285d3e39 *doc/CNEr.R
2de5bf342921f97286a553613e6aa05b *doc/CNEr.Rmd
bdff4acc54085e5eb7f2fe1027f8c63a *doc/CNEr.html
d2a39537337b794555e027298999ab96 *doc/PairwiseWholeGenomeAlignment.R
757ca2f473ff91bd78bd8cef0d315e38 *doc/PairwiseWholeGenomeAlignment.Rmd
3d4b893868f5126ae82404623f17b4bf *doc/PairwiseWholeGenomeAlignment.html
f3a212dd453d92a27a3a47937f58ac0b *doc/index.html
e1225e2387a670279ab8e2f5695a5b62 *extdata/chr4.hg19.galGal3.net.axt.gz
9c8c4347211a68e2d2bdca8b3eb2a995 *extdata/cne2wBf_AstMex102_danRer10_48_50
144c4e621b5903d66fce90d40ff3452a *extdata/cne2wBf_cteIde1_danRer10_100_100
703b7fae3bd724a255a201e07f0f19ff *extdata/cne2wBf_cypCar1_danRer10_100_100
aad28bc8c6f7865a28ec3b4c06aa7517 *extdata/cne2wBf_danRer10_hg38_45_50
ee3f3bafa1ea2dd69057da90d4df026a *extdata/danRer10.hg38.net.axt
f0c8e5aa59cfa775c42fa54300a7e108 *extdata/danRer10CNE.sqlite
32f9e6948d016e9935633c6f1c34ed43 *extdata/filter_regions.danRer10.bed
8f357f770b042ed678b4f2b38e687053 *extdata/filter_regions.hg38.bed
83a080592fbc9a9e1e3c8045874bc4b6 *extdata/hg38.danRer10.net.axt
109773cc892befc7f16e64051a2f3180 *extdata/rmsk.fa
ecfff71e276939f8799b675c0035c131 *help/AnIndex
b8d2b10895761d2322057c076bdd3ed5 *help/CNEr.rdb
d3e0bca308990710ac715703d172ecdc *help/CNEr.rdx
b696c8ae9958eff4fecd0256af4b5dbc *help/aliases.rds
e112428930ef5a3640d0fcffb68c93f8 *help/paths.rds
022e7fa5c4709e6503fa966ec828f82e *html/00Index.html
3845aef6126cf18c45937f292f23508c *html/R.css
2b16974b72a666609d884ae5b7add39d *libs/x64/CNEr.dll
ec85324af0f35f446e7f94ec7477fd3c *obsolete/CNEr.Rnw
6922454ebccccaa223412f1e90952a48 *obsolete/alignment.c
3b502ef13330de1cd98dc4288a6f43d1 *obsolete/ceScan.r
d14cd8fb9911e5da6a2ba93af6d5974a *obsolete/ceScanR.r
0b52e0839eedfa011db6788f30472403 *obsolete/class.r
cdd26c6f3a003ce2e80db8921c7a7857 *obsolete/src/ceScan.c
b9b504316a8eeb190646972e165f979f *obsolete/src/ceScanBranch1.c
ed4391ac6a30aa3da32d63d7cbf5b17a *obsolete/src/ceScanBranch2.c
0a1fe70559c587a9104001f5203af75d *obsolete/src/compile
9e3c821c3f64ccfe466aa466d5f82ec5 *scripts/danRer10Pipeline.R
5f67d785a452ecc6f8168088a7b8b0c9 *scripts/prepareData.R
