BSFDataSet              BSFDataSet object and constructors
annotateWithScore       Annotation function for BSFDataSet object
coverageOverRanges      Coverage function for BSFDataSet objects
getMeta                 Accessor method for the meta data of the
                        BSFDataSet object
getRanges               Accessor method for the ranges of the
                        BSFDataSet object
getSignal               Accessor method for the signal data of the
                        BSFDataSet object
getSummary              Accessor method for the summary slot of the
                        BSFDataSet object
makeBindingSites        Define equally sized binding sites from peak
                        calling results and iCLIP crosslink events.
mergeSummaryPlot        Plot summarized results of the different
                        binding site merging and filtering steps
rangeCoveragePlot       Plot crosslink events coverage over range
reproducibilityFilter   Replicate reproducibility filter function
reproducibiliyCutoffPlot
                        Plot to that shows how many replicates support
                        each binding site
setRanges               Setter method for the ranges of the BSFDataSet
                        object The GRanges object that holds the
                        genomic ranges information can be replaced.
setSignal               Setter method for the signal data of the
                        BSFDataSet object
setSummary              Setter method for the summary slot of the
                        BSFDataSet object
show                    Show method to for the BSFDataSet
supportRatio            Support ratio function for BSFDataSet objects
supportRatioPlot        Plot that shows the binding site support ratio
