# Generated by roxygen2: do not edit by hand

export(ancom)
export(ancombc)
export(ancombc2)
export(secom_dist)
export(secom_linear)
export(sim_plnm)
import(mia)
import(stats, except = filter)
import(stats, except = filter)

importFrom(CVXR,Minimize)
importFrom(CVXR,Problem)
importFrom(CVXR,Variable)
importFrom(CVXR,matrix_frac)
importFrom(CVXR,solve)
importFrom(DescTools,Winsorize)
importFrom(Hmisc,rcorr)
importFrom(MASS,ginv)
importFrom(Rdpack,reprompt)
importFrom(S4Vectors,DataFrame)
importFrom(SingleCellExperiment,altExp)
importFrom(SummarizedExperiment,assay)
importFrom(SummarizedExperiment,colData)
importFrom(SummarizedExperiment,rowData)
importFrom(doParallel,registerDoParallel)
importFrom(doRNG,"%dorng%")
importFrom(dplyr,bind_rows)
importFrom(dplyr,filter)
importFrom(dplyr,left_join)
importFrom(dplyr,mutate)
importFrom(dplyr,right_join)
importFrom(emmeans,contrast)
importFrom(emmeans,emmeans)
importFrom(energy,dcor)
importFrom(energy,dcor.test)
importFrom(foreach,"%:%")
importFrom(foreach,"%dopar%")
importFrom(foreach,foreach)
importFrom(lme4,lmerControl)
importFrom(lmerTest,lmer)
importFrom(magrittr,"%>%")
importFrom(nloptr,neldermead)
importFrom(parallel,makeCluster)
importFrom(parallel,stopCluster)
importFrom(rlang,.data)
importFrom(rngtools,setRNG)
importFrom(tibble,rownames_to_column)
importFrom(tidyr,pivot_longer)
importFrom(utils,combn)
