69eb44fbef2db15842f9b2fb467b255c *DESCRIPTION
542fee070718010bc2bc88fc368cbf7b *INDEX
0e6998dccf2e1a257c3a2f3188966d68 *LICENSE
30fca9846f6cb0a0f04ce04101dd32f4 *Meta/Rd.rds
2e354ee686d42a8631d8ef49e8de63fd *Meta/data.rds
1d15b8cd6573641f81c4126b0438e9c2 *Meta/features.rds
d007a3e5f427150d8d12d8afcc9ebc34 *Meta/hsearch.rds
c71ab8060f3aaa6e88ee1dca49382425 *Meta/links.rds
ac7f24e061013f2812ee2af081388ae5 *Meta/nsInfo.rds
c2aa34a7522da1743eb74da4c8c3d488 *Meta/package.rds
992ebdd5c39a4b64bc80256e5c1cf9bf *Meta/vignette.rds
4241f5b5171e47d5150bad01ae0c0cef *NAMESPACE
7e3fdc80a9f02aa5dcd26929bb124793 *NEWS
d6c68f1fe41ced6e98a766a3757313da *R/scruff
25c7ccd4f8abba84d5520c2c696c80c8 *R/scruff.rdb
9356cadfdbda5a0c126e1018b20d28c8 *R/scruff.rdx
c66ae87875fdac98dad8e6ab4b0f4676 *data/bamExample.rda
fcb4e82f263128042dadf13f0fab612f *data/barcodeExample.rda
89bc6ff8fb0bef0f4510654ca33eecb0 *data/cbtop10000.rda
e51860626d7cfc5556a151308a61f77e *data/sceExample.rda
fcfc07765b48350083f125a31070c35f *data/validCb.rda
d9a760b6e23582f9932edcc084a0deaa *doc/index.html
a833a5728195b5ddd3dc87c98a3ac9e4 *doc/scruff.R
6aa7db618bb6463832365745cb23d1a7 *doc/scruff.Rmd
0c28f76a5c89ea5ac6198dad4da3d7f4 *doc/scruff.html
c0b8b94c37ead1dd7feed0186747e53b *extdata/GRCm38_MT.fa
09e36a1c6a9f668a2487ec5c58ce1b9c *extdata/GRCm38_MT.gtf
b505b41fd5718ffd3eb71813d0d4fcae *extdata/SRR5167880_E18_20160930_Neurons_Sample_01_5000.bam
74abe8130c02e803e66c0e3b57201761 *extdata/SRR5167880_E18_20160930_Neurons_Sample_01_filtered_barcode.tsv
0fdf95c3beb5eff50934204c6109adf2 *extdata/vandenBrink_1h1_L001_R1_001.fastq.gz
983a0032d33116c75363d1d1efa54275 *extdata/vandenBrink_1h1_L001_R2_001.fastq.gz
d3aa0aa1d9520b603e8aa7f78d039b27 *help/AnIndex
6969f5bc10d25b6456979e5c04a69dcb *help/aliases.rds
31c1ebd10f7e579594bea7e7a1812f95 *help/paths.rds
07750cec54b0fb01a8b75ad0d7c4a13a *help/scruff.rdb
da47329736dba3b7708484b510a6d6d6 *help/scruff.rdx
c8b709a77175d554bc8ad1fa85efe75c *html/00Index.html
b6763e6916890c631fdc3f2643803b1a *html/R.css
7a5799774363378edcb776d09e44f216 *html/alignRsubread.html
f0d2513612d48ce1f363ec72772ff400 *html/bamExample.html
9c2f442520f60a89173c346c97f71833 *html/barcodeExample.html
b0c3d5c1651ab1e24671f6eb2aca0259 *html/cbtop10000.html
9c6851208c9088df8907c3db26b581d1 *html/countUMI.html
2961f838c7730daab6ce44132b84cd69 *html/demultiplex.html
0eb5b783f4d20cb9bf979889e8bb9664 *html/gview.html
03928ef7a7da00c6b30318a6f107fe09 *html/qcplots.html
24dea50997c85b14db3cf83e4505027f *html/rview.html
314d1028ceaee9c8472c3a13391886bf *html/sceExample.html
9273570089af9a8509e6ce5153cfd287 *html/scruff.html
3063467f2e116bdd3528acbfd9e411d4 *html/tenxBamqc.html
d2d5d392ba19114bc50dd8adc0a13619 *html/validCb.html
