f99f9de02eaaf0f159e053842c2dbebe *DESCRIPTION
fd29a51879cfabd6417bf2289b2f3f0d *INDEX
b33d2248dc8e0943ce70af7169299889 *Meta/Rd.rds
0c8b6ea68394bbc690ce4986b7e48b03 *Meta/data.rds
1d15b8cd6573641f81c4126b0438e9c2 *Meta/features.rds
7348c7fa3a8679828477798c668be6a8 *Meta/hsearch.rds
eb7e091c3206d12d3320d3d9ffce1576 *Meta/links.rds
60aef9cc025bbcbb1bd0caae869dec55 *Meta/nsInfo.rds
eeeb922d8b566982ee3c3b5d8db3e585 *Meta/package.rds
bf3c39f53efe3ad7207077bb37d80c58 *Meta/vignette.rds
7217e2e87643c9f2970098660c2dfc85 *NAMESPACE
075e75b6c198869354320762b2113772 *NEWS
d6c68f1fe41ced6e98a766a3757313da *R/packFinder
bc8fed4cf391771defda1f7f9b16a61d *R/packFinder.rdb
af752b48d2f2b9bd8d4517a7aa8cb77d *R/packFinder.rdx
d195a0d8b0635ad3e02890c37f08d8ec *data/arabidopsisThalianaRefseq.rda
7c10231018ee618e9321552c9774b89c *data/packMatches.rda
1450f1776b1139a47081e4f43f3c14e6 *doc/index.html
fe47d4f69bf44ce0607537eae1e8e0df *doc/packFinder.R
d73a662aa4ef6ee5952e08208776ba51 *doc/packFinder.Rmd
7bd22746ee4c3d9eddacc1f78391fdf3 *doc/packFinder.html
cd94aa5a1fc1a44212132b4f2ebc440b *extdata/packMatches.blast6out
18bd0b7c6a73f9ac12ed4817a2b7cd63 *extdata/packMatches.csv
37d897eb070862e4f8eba251eace54e1 *extdata/packMatches.fasta
8ef1c9cbbb2ddf3e20a4e3794e28447f *extdata/packMatches.uc
507829666de1f6426b6c1a580637ccf5 *help/AnIndex
ee2e9cf7cf157ec9959a90efda5248cd *help/aliases.rds
17a864df8703a27fe9aeb2659df74b91 *help/packFinder.rdb
0b26fc3979cc6a3343e385e7ade9a0e8 *help/packFinder.rdx
2d1607ce3e3254c5b60ab3a52e1ed110 *help/paths.rds
71e15675385dc95555b788f3dce97ad2 *html/00Index.html
b6763e6916890c631fdc3f2643803b1a *html/R.css
6bc9030717080a74b1f26a83522d2a68 *html/arabidopsisThalianaRefseq.html
ad0b9627b0bb7b2d8dc64ac7011ad9dd *html/blastAnalysis.html
1ca0c7529e6cb8b2223342f3ada10ebe *html/blastAnnotate.html
2c53680a699ee67fe43132654a47c169 *html/collapseSeqs.html
6ea936a29c9a07b01835bc25e8b83537 *html/filterWildcards.html
cf08ff0751ae5c34ba89762c6ecea8c9 *html/getPackSeqs.html
e2dc1195869b5e50340b9337d14e92da *html/getPacksFromCsv.html
f97eb4716b37519ab5af9c9bf1bdb980 *html/getPacksFromFasta.html
bf02f1ffd7f36dbb715ae95ba11c999b *html/getPacksFromGRanges.html
3331457699fb006dd855bc94909de7fc *html/getTsds.html
a9e8620791d23a5a456e882f8ab97c67 *html/identifyPotentialPackElements.html
5828cf17a24059316589ab6e8ac7f52b *html/identifyTirMatches.html
710ff15b9ba9763fafcc76b491e92641 *html/makeBlastDb.html
4ac26552b1f348080e787f15fc6ecb4b *html/packAlign.html
06f368e3b02ec4fc92c9eddfac16a04b *html/packBlast.html
407c1e8842d24b44624104649e127828 *html/packClust.html
6bd3e1745d5008fd0395e3d9753783bd *html/packFinder.html
aec1a0998699d89ab86009c7efd55ac6 *html/packMatches.html
8f62cc828d61ca428bf36510a97cc90a *html/packSearch.html
07acc6f1ff83544fcc69d82f009766d6 *html/packsToCsv.html
2b651a9839b50bc1dd35b12a1a13ea79 *html/packsToFasta.html
6cf0f0b023cd12ae00e0b152fb1fa1fe *html/packsToGRanges.html
ec8141299dfc2f14ce0f05cab6478d6c *html/readBlast.html
2af86513e5f92086a6ec9cb309dd93f9 *html/readUc.html
ff945912c8e023d5415579f83b77c648 *html/tirClust.html
5e79a916b35847557b5df41a26a86982 *packFinder_hex.png
d6a37a19c5ca8dfbf1fcbf8ed222267b *scripts/blast6out.R
cd61f0bbdb8981a59cf23c14421aab34 *scripts/csv.R
494a7ab5751dfdd054c0e3fc79f4a7e4 *scripts/fasta.R
1b89f96f8728abce4ca2cd853b349131 *scripts/uc.R
