numCallable {genoset} | R Documentation

## Count Rle positions >= min

### Description

For Rle coverage vector, count number of positions where value >= min, think callable bases.

### Usage

    numCallable(rle, bounds, min)

### Arguments

`rle` | integer Rle, no NAs
`bounds` | IRanges or matrix, positions in Rle to consider. If `bounds` is a matrix, the first two columns are used as start and end.
`min` | scalar integer, count Rle positions >= this value.

### Value

integer vector of length nrow(bounds)

[Package genoset version 1.45.1 Index]