createAnnotation {cn.farms} | R Documentation

## Creation of annotation files

### Description

Annotation files for cn.farms are created

### Usage

    createAnnotation(filenames = NULL, annotation = NULL, annotDir = NULL,
      checks = TRUE)

### Arguments

`filenames` | An absolute path of the CEL files to process.
`annotation` | Optional parameter stating the annotation from a pd-mapping.
`annotDir` | Optional parameter stating where the annotation should go.
`checks` | States if sanity checks should be done.

### Value

`NULL`

### Note

The annotation files used for cn.farms will be placed in the current work directory under annotations.

### Author(s)

Djork-Arne Clevert okko@clevert.de and Andreas Mitterecker mitterecker@bioinf.jku.at

### Examples

    ## Not run:
    library("hapmapsnp6")
    celDir <- system.file("celFiles", package = "hapmapsnp6")
    filenames <- dir(path = celDir, full.names = TRUE)
    createAnnotation(filenames = filenames)

    ## End(Not run)

[Package cn.farms version 1.38.0 Index]