.checkLDF	dot-checkLDF
.checkTSE	dot-checkTSE
addLabel	addLabel
aggValue	aggValue
asLeaf	asLeaf
changeTree	changeTree
colLinks	TreeSummarizedExperiment-accessor
colLinks,TreeSummarizedExperiment-method	TreeSummarizedExperiment-accessor
colnames<-,TreeSummarizedExperiment-method	TreeSummarizedExperiment-accessor
colTree	TreeSummarizedExperiment-accessor
colTree,TreeSummarizedExperiment-method	TreeSummarizedExperiment-accessor
convertNode	convertNode
countLeaf	countLeaf
countNode	countNode
detectLoop	detectLoop
distNode	distNode
findAncestor	findAncestor
findChild	findChild
findDescendant	findDescendant
findOS	findDescendant
findSibling	findSibling
isLeaf	isLeaf
LinkDataFrame	LinkDataFrame-constructor
LinkDataFrame-class	LinkDataFrame-class
LinkDataFrame-constructor	LinkDataFrame-constructor
matTree	matTree
phylo	phylo
printNode	printNode
resolveLoop	resolveLoop
rowLinks	TreeSummarizedExperiment-accessor
rowLinks,TreeSummarizedExperiment-method	TreeSummarizedExperiment-accessor
rownames<-,TreeSummarizedExperiment-method	TreeSummarizedExperiment-accessor
rowTree	TreeSummarizedExperiment-accessor
rowTree,TreeSummarizedExperiment-method	TreeSummarizedExperiment-accessor
shareNode	shareNode
showNode	showNode
signalNode	signalNode
subsetByNode	TreeSummarizedExperiment-accessor
subsetByNode,TreeSummarizedExperiment-method	TreeSummarizedExperiment-accessor
tinyTree	tinyTree
toTree	toTree
trackNode	trackNode
transNode	convertNode
TreeSummarizedExperiment	TreeSummarizedExperiment-constructor
TreeSummarizedExperiment-accessor	TreeSummarizedExperiment-accessor
TreeSummarizedExperiment-class	TreeSummarizedExperiment-class
TreeSummarizedExperiment-constructor	TreeSummarizedExperiment-constructor
unionLeaf	unionLeaf
[,TreeSummarizedExperiment,ANY,ANY,ANY-method	TreeSummarizedExperiment-accessor
