# Generated by roxygen2: do not edit by hand

export(LinkDataFrame)
export(TreeSummarizedExperiment)
export(addLabel)
export(aggValue)
export(asLeaf)
export(changeTree)
export(colLinks)
export(colTree)
export(convertNode)
export(countLeaf)
export(countNode)
export(detectLoop)
export(distNode)
export(findAncestor)
export(findChild)
export(findDescendant)
export(findOS)
export(findSibling)
export(isLeaf)
export(matTree)
export(printNode)
export(resolveLoop)
export(rowLinks)
export(rowTree)
export(shareNode)
export(showNode)
export(signalNode)
export(subsetByNode)
export(toTree)
export(trackNode)
export(transNode)
export(unionLeaf)
exportClasses(LinkDataFrame)
exportClasses(TreeSummarizedExperiment)
exportMethods("[")
exportMethods("colnames<-")
exportMethods("rownames<-")
exportMethods(colLinks)
exportMethods(colTree)
exportMethods(rowLinks)
exportMethods(rowTree)
exportMethods(subsetByNode)
import(S4Vectors)
import(SingleCellExperiment)
importClassesFrom(S4Vectors,DataFrame)
importClassesFrom(SingleCellExperiment,SingleCellExperiment)
importClassesFrom(SummarizedExperiment,RangedSummarizedExperiment)
importClassesFrom(SummarizedExperiment,SummarizedExperiment)
importFrom(S4Vectors,DataFrame)
importFrom(S4Vectors,head)
importFrom(S4Vectors,metadata)
importFrom(S4Vectors,tail)
importFrom(SummarizedExperiment,"colData<-")
importFrom(SummarizedExperiment,"rowData<-")
importFrom(SummarizedExperiment,assays)
importFrom(ape,reorder.phylo)
importFrom(ape,rtree)
importFrom(dplyr,'%>%')
importFrom(dplyr,arrange_all)
importFrom(dplyr,group_by)
importFrom(dplyr,mutate)
importFrom(dplyr,mutate_if)
importFrom(dplyr,row_number)
importFrom(methods,as)
importFrom(methods,callNextMethod)
importFrom(methods,is)
importFrom(methods,new)
importFrom(methods,setClass)
importFrom(methods,setOldClass)
importFrom(rlang,.data)
importFrom(stats,reorder)
importFrom(stats,setNames)
importFrom(utils,flush.console)
importMethodsFrom(SingleCellExperiment,show)
