7c940e117947d1495fc805a56a585f95 *AQP7/hg19_AQP7_gr.RDS
6156e25892b953e3e13c482d42533c6b *AQP7/hg38_AQP7_gr.RDS
f94518f75e6ef1068674f303a991e850 *AQP7/hs37d5_AQP7_gr.RDS
6a483a0c48db406c48a38990d834c0ef *DESCRIPTION
922249828dc8beb59b6c8edbbcfb726e *HLA/hg19_HLA_gr.RDS
6cadaac2a031fa5e81230e7b6eef0818 *HLA/hg38_HLA_gr.RDS
eb80de88f333fc8bd1b2fe22a069800c *HLA/hs37d5_HLA_gr.RDS
5b17382d757b8568a16a287782bb8b25 *INDEX
e80800963e396b920da6fdc13dc5807d *Meta/Rd.rds
97d00327c86bbbd8761e43512869a3f0 *Meta/data.rds
1d15b8cd6573641f81c4126b0438e9c2 *Meta/features.rds
ba4bb8136f65f6df2cc43f94b59b3c5a *Meta/hsearch.rds
8ca0bec0bd5be17bb4a2e25678c1b91f *Meta/links.rds
baab6352c6ce99e8aeca4d8a452e0f6a *Meta/nsInfo.rds
7da03f8ca4f3304812fb3c8754957416 *Meta/package.rds
3a928c67dcab724652461fb1ea58e532 *Meta/vignette.rds
dbbb8416030ca6c55bd60ab19bb59110 *NAMESPACE
f68885c1e19e41468d3a26d044204323 *NEWS
d6c68f1fe41ced6e98a766a3757313da *R/MADSEQ
7e6d496cd290cef62cfaaf3b990165b1 *R/MADSEQ.rdb
df37c7c61cff87b8b73416d5484211de *R/MADSEQ.rdx
b137cac482f6d43cc602c4cf31e4eb9a *data/Rdata.rdb
1dafcb76d75ca7eafa84dfe97d9e6a81 *data/Rdata.rds
0765f3fbe04147ffcf74121bc5865253 *data/Rdata.rdx
2e4ebc6fc3af0ce1c2907f9548d8e0af *doc/MADSEQ-vignette.R
223d4a9d1f4b7467fa58dd887b2d207a *doc/MADSEQ-vignette.Rmd
ff450b0093b52f49f8b71047a0f8c858 *doc/MADSEQ-vignette.html
8d2a12cbcba7e2d17c0a7f5e2ce7d491 *doc/index.html
45a6f85c06b89084384f5baa3411829c *extdata/aneuploidy.bam
5d2f9800c7701b9c069549d9b538f3c0 *extdata/aneuploidy.bam.bai
e447cdbc61dc910c1ecf49413830e680 *extdata/aneuploidy.vcf.gz
801ca98d5c1fc701890c8720829ba02e *extdata/aneuploidy.vcf.gz.tbi
3460ad549cd63b775e1e2d2c6839c652 *extdata/aneuploidy.vcf1.gz
42c16af5590d9f56b3cd4ee1f640f09e *extdata/normal.bam
27360ec7b0b8b4f49baab9fb28a81b31 *extdata/normal.bam.bai
d8d3ffb5a1f6a0662e85497ec4e2f7da *extdata/normal.vcf.gz
c7af036642ac3916f25d4568da51f929 *extdata/target.bed
6ac2988079669859297d35397890ee7f *gap/hg19_gap_gr.RDS
2ee634fa8ac714a611294c4ebbe964c6 *gap/hg38_gap_gr.RDS
178175aedaf19d4b5fc37b953fdd8365 *gap/hs37d5_gap_gr.RDS
806e412887257e27d215b26eb8427a23 *help/AnIndex
c404ef17dc3cdc194e1e71b36ac42cd7 *help/MADSEQ.rdb
b540972c54c469659fccbe12e6d5b58a *help/MADSEQ.rdx
ea8cde211f9d6059fe035c55e63e4b75 *help/aliases.rds
c06d0b1895ae034759ef3f82341c43aa *help/paths.rds
8f32ce4c60eeec5dd42d9688c3f9c1ed *html/00Index.html
cdc3f19fb920eb70cc0636ca4a85b4f0 *html/MADSEQ-package.html
ea788b6905988d634cb6d1125091e8b6 *html/MadSeq.html
b6763e6916890c631fdc3f2643803b1a *html/R.css
8420f117045d92566eca26493ad1a034 *html/aneuploidy_chr18.html
86a4039d170726806bc7697d20ae9516 *html/deltaBIC.html
77a892b4f9eb72ea396d538a2744c789 *html/normalizeCoverage.html
86294fc7f8f032b1512c7ce859a22488 *html/plotFraction.html
78fb31e662c1beec9bc93e2722bb0e26 *html/plotMadSeq.html
269b32996942468302c0b499517779d7 *html/plotMixture.html
1ed483c066ac587d92740e5db2031b2c *html/posterior.html
e848cace207de070a32a398e994f673b *html/prepareCoverageGC.html
d37731a94e929d89e590359976686df0 *html/prepareHetero.html
6434da5fc892ffc4267fbba0c019651b *html/runMadSeq.html
cb14f7e33b5578b44bd4f71bbf824b24 *html/summary-method.html
d53a9eb3d9e812c6f07ff9c3340a3bed *rjags/FourMix.txt
91892f4c8a1065de46951f299d8e2d5f *rjags/LOH.txt
5930df090a3de2ff95284ec8e5724584 *rjags/OneMix.txt
80f9a5a9b492296fe89b8ddf793779b9 *rjags/TwoMixMonosomy.txt
fd18d5914f99278bc7bf005e6fded968 *rjags/TwoMixTrisomy.txt
