CHANGES IN VERSION 1.31.1
------------------------

    o Fix bugs in genes_kept to deal with NA in data
    
CHANGES IN VERSION 1.27.4
------------------------

    o Fix bugs in vignette
    o Improvements for notes and warnings in R cmd check 
    
CHANGES IN VERSION 1.27.3
------------------------

    o Improvement for plot_pathway_overall function 

CHANGES IN VERSION 1.27.2
------------------------

    o Fix bugs in convertId function, which was caused by the updates of biomaRt package
    
CHANGES IN VERSION 1.27.1
------------------------

    o Fix bugs in download_KEGGfile function, which was caused by the updates of KEGG web site.
    o New function: plot_pathway_overall function to plot gene expression in pathway level.
    o Improvement for documents and examples.
    
CHANGES IN VERSION 1.25.1
------------------------

    o Fix bugs in download_KEGGfile function.

CHANGES IN VERSION 1.19.3
------------------------

    o Fix bugs in download_KEGGfile function, which was caused by the updates of KEGG web site.
    
CHANGES IN VERSION 1.19.1
------------------------

    o Fix a bug in download_KEGGfile function, which was caused by the updates of KEGG web site.

CHANGES IN VERSION 1.9.3
------------------------

    o Fix a bug in example of convertId function, which was caused by update of BioMart database. Thanks Dan.

CHANGES IN VERSION 1.9.1
------------------------

    o Fix a bug when pathway_min is set to 1. Thanks Norbert Auer.

CHANGES IN VERSION 1.7.7
------------------------

NEW FEATURES

    o New function: The pathway map without species information can be used as reference map with parameter speciesRefMap.

CHANGES IN VERSION 1.7.6
------------------------

NEW FEATURES

    o New function: Downloading the latest pathway/gene link from KEGG website.

CHANGES IN VERSION 1.7.5

NEW FEATURES

    o Changes in examples.

CHANGES IN VERSION 1.7.4
------------------------

NEW FEATURES

    o Improvement for documents and examples.

CHANGES IN VERSION 1.7.3
------------------------

NEW FEATURES

    o Improvement for the web interface.

CHANGES IN VERSION 1.7.2
------------------------

NEW FEATURES

    o New function plot_pathway_cor: Caculating correlations between groups in each pathway and comparing with the correlations for other genes.

CHANGES IN VERSION 1.7.1
------------------------

NEW FEATURES

    o Compound data was also supported; The parameters were modified for web interface.

CHANGES IN VERSION 0.99.2
-------------------------

NEW FEATURES    

    o Improvement in processing expression matrix with only one time point

CHANGES IN VERSION 0.99.1
-------------------------

NEW FEATURES

    o Add the parameter lwd when type='lines' 

CHANGES IN VERSION 0.99.0
-------------------------

NEW FEATURES

    o Improvement in the description of this package. Add notes for users in plot_profile function

CHANGES IN VERSION 0.1.2
------------------------

    o Improvement in the codes of vignette file and re-submit to bioconductor as the final version

CHANGES IN VERSION 0.1.0
------------------------

NEW FEATURES

    o Submit to bioconductor

CHANGES IN VERSION 0.0.7
------------------------

NEW FEATURES

    o Finish the vignette file

CHANGES IN VERSION 0.0.6
------------------------

NEW FEATURES

    o Improvement in help file and example source

CHANGES IN VERSION 0.0.5
------------------------

NEW FEATURES

    o Add return value for plot_pathway function; Release to my colleague

CHANGES IN VERSION 0.0.4
-------------------------

NEW FEATURES

    o Finish help files and example source

CHANGES IN VERSION 0.0.3
------------------------

NEW FEATURES

    o Add example data files

CHANGES IN VERSION 0.0.2
------------------------

NEW FEATURES

    o Improvement in figure details

CHANGES IN VERSION 0.0.1
------------------------

NEW FEATURES


    o Build 'CHANGES IN VERSION' package by CMD Install and CMD check