302269db30056e1b603b401180202a7c *DESCRIPTION
da0b1b149795f1a9bfcc5edec3d06133 *INDEX
c74baf9276cb373dc16d9ba14f6d3ae7 *Meta/Rd.rds
6b8a8416656dee2eb61e842962098972 *Meta/data.rds
1d15b8cd6573641f81c4126b0438e9c2 *Meta/features.rds
49f0ef30bd9a967365fcc34c4e254ce9 *Meta/hsearch.rds
8bcff71dc6d47fc366000171ff27f403 *Meta/links.rds
d4f551110422e869796f9c80a9238f48 *Meta/nsInfo.rds
aeb957184a022e33fb6321580d9ae6da *Meta/package.rds
4102b036fbdc9224c569b5879f6a16dc *Meta/vignette.rds
c729afe505317cbea3194f50536bae3b *NAMESPACE
dadb8efd4fd4d43236eb75d1bf0dede9 *NEWS
d6c68f1fe41ced6e98a766a3757313da *R/IMAS
7b83e3b4e2bceb56a890ab1eb0ff8a7b *R/IMAS.rdb
2598bf720a1cabe52c10930fb561c42c *R/IMAS.rdx
7a368f8f00405836f760e99da7095ec2 *data/bamfilestest.rda
da7455944aaaf37eb2d2bd7b8274cf82 *data/sampleGroups.rda
0bf5a1df3268dcf25000d86529762649 *data/sampleclinical.rda
ea10c1edc3c0216525523818012c5198 *data/samplemethyl.rda
9e6dd674cb5aead3ee300bb2daa9876e *data/samplemethyllocus.rda
1ec55d283660c58fbee63c54e6545cab *data/samplesnp.rda
2e104fed8c8acaf7c6afe6c9ed32627e *data/samplesnplocus.rda
97ad65e42da87bf03aba414cc41372f6 *doc/IMAS.R
295684bdf445b2dc5397480ed699c11e *doc/IMAS.Rnw
aaa181f746d53d7e6295f268b6d0b667 *doc/IMAS.pdf
fcfb66e3e7e5eecdc48963aa8ab0f1a8 *doc/index.html
7146bcade8174bb097836cf9d8cd2f5b *extdata/sampleDB
651192ebdbbf6b2d15285513857d09eb *extdata/samplebam/srt.BreastPatient_1.bam
0d641af28825a16dff7abcd0416f8488 *extdata/samplebam/srt.BreastPatient_1.bam.bai
58e60a3ba5723a3a1b49b9bdce5c834a *extdata/samplebam/srt.BreastPatient_10.bam
70ea3828e637aeb3801fbf5f28178aa1 *extdata/samplebam/srt.BreastPatient_10.bam.bai
206ceda6373d22796449acff4a80b6a0 *extdata/samplebam/srt.BreastPatient_11.bam
f792d1e3be6310fa964a1ede220dfe7c *extdata/samplebam/srt.BreastPatient_11.bam.bai
8ce9ce404dcaa11904e732226953a8a7 *extdata/samplebam/srt.BreastPatient_12.bam
4ae84e8f5748193e62afd530b73e583b *extdata/samplebam/srt.BreastPatient_12.bam.bai
00804df06f0b1952c15722c70c29f296 *extdata/samplebam/srt.BreastPatient_13.bam
f9f7522a0ae23afdd2ef73238738ee08 *extdata/samplebam/srt.BreastPatient_13.bam.bai
fcb38e8469c906ac0b3e540bc1fdbb00 *extdata/samplebam/srt.BreastPatient_14.bam
8f0a95d5b5728bda14933177626e40f5 *extdata/samplebam/srt.BreastPatient_14.bam.bai
43f811207053244c1caef2100d6de8df *extdata/samplebam/srt.BreastPatient_15.bam
12ef400885f0748587a35a059a34e68e *extdata/samplebam/srt.BreastPatient_15.bam.bai
1811090bd315d70ffd597440a6510bbf *extdata/samplebam/srt.BreastPatient_16.bam
4d436122b485344b5b8bb1972d3e870b *extdata/samplebam/srt.BreastPatient_16.bam.bai
4ffcbb54d586de911e89a5e008a1858a *extdata/samplebam/srt.BreastPatient_17.bam
2f0eec7240f61462e9c539c160760aef *extdata/samplebam/srt.BreastPatient_17.bam.bai
9c6c7225c38197f395162ed2beeae6a3 *extdata/samplebam/srt.BreastPatient_18.bam
c63e61a6fbd9cd7a0d448d1b35aee0d7 *extdata/samplebam/srt.BreastPatient_18.bam.bai
c9d71deeced6cec0fc90b78c38e38dcb *extdata/samplebam/srt.BreastPatient_19.bam
d4963f23f334fe4003eed9d5ab14b2b9 *extdata/samplebam/srt.BreastPatient_19.bam.bai
0fd2d908a72618f84f92c66d623af496 *extdata/samplebam/srt.BreastPatient_2.bam
21531eb0a9f7e9482e2465a8a58ec2c2 *extdata/samplebam/srt.BreastPatient_2.bam.bai
f0c3311a52d15ea34b3e8ece989f3d47 *extdata/samplebam/srt.BreastPatient_20.bam
2f922a1c92f6fbfd08fe82350bedec04 *extdata/samplebam/srt.BreastPatient_20.bam.bai
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4df8bb9bcb91015d3e7c9210ab02b162 *extdata/samplebam/srt.BreastPatient_21.bam.bai
bcda06dc927bb3904b490b0167282e18 *extdata/samplebam/srt.BreastPatient_22.bam
a2948ebcdb930e80f1aa11b53fa3b4ce *extdata/samplebam/srt.BreastPatient_22.bam.bai
3beb545e1e94f5364090e4c12e7c209e *extdata/samplebam/srt.BreastPatient_23.bam
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d8bc8a094d1773c40413ddb005b5fac5 *extdata/samplebam/srt.BreastPatient_24.bam
5632b6f3ae790526a21c3eec9bea3cce *extdata/samplebam/srt.BreastPatient_24.bam.bai
3e8f7fd1e5353a1fd7967ed799ea83cc *extdata/samplebam/srt.BreastPatient_25.bam
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9d578eaa7ea369aca755cab54726f62c *extdata/samplebam/srt.BreastPatient_26.bam
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2003890aa0b86c2a7fbffa5d2512b001 *extdata/samplebam/srt.BreastPatient_27.bam
cc261c200904ce4c94ddc65c470178e5 *extdata/samplebam/srt.BreastPatient_27.bam.bai
37651668b5828c360ed56395a391f408 *extdata/samplebam/srt.BreastPatient_28.bam
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ab845e33d24929dc58bd00c43e92bafe *extdata/samplebam/srt.BreastPatient_29.bam
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66cbcbaf013890dfe1c61eb18dd67940 *extdata/samplebam/srt.BreastPatient_3.bam
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bc2d7c4052bd789bc1e45ac44f23bc7e *extdata/samplebam/srt.BreastPatient_30.bam
bd73fa258ef48491229b9b90be7cd2eb *extdata/samplebam/srt.BreastPatient_30.bam.bai
920e24c0ced7e23b8acf2358b4a18043 *extdata/samplebam/srt.BreastPatient_31.bam
fa708cc841f4a475849a24d08d4ca1ad *extdata/samplebam/srt.BreastPatient_31.bam.bai
2002429e75c11a30f84a6f28b78ddb9d *extdata/samplebam/srt.BreastPatient_32.bam
2bfa6c3e43af594ea7d2e9048cf94850 *extdata/samplebam/srt.BreastPatient_32.bam.bai
6a39470c3bdd2ece0b39f25b357e9db8 *extdata/samplebam/srt.BreastPatient_33.bam
9aa31868fcf09579a7bd7426aa86233f *extdata/samplebam/srt.BreastPatient_33.bam.bai
87d6eec327db52887c7b7dbd9691c2b2 *extdata/samplebam/srt.BreastPatient_34.bam
2ad8b3161198e9bdff02ae0ff7e3cc28 *extdata/samplebam/srt.BreastPatient_34.bam.bai
b59b6979f6cef8395f01bb41a0a395e3 *extdata/samplebam/srt.BreastPatient_35.bam
19dea89f8dbe01135aab8d2cf86a1a9a *extdata/samplebam/srt.BreastPatient_35.bam.bai
56efab33f157cb3ea591579876153904 *extdata/samplebam/srt.BreastPatient_36.bam
66f78f37f3d1c4a282f640c83de16813 *extdata/samplebam/srt.BreastPatient_36.bam.bai
fcc4cc1b030dd61d9ef8ba006175424c *extdata/samplebam/srt.BreastPatient_37.bam
91052ee563218077c46ee9ee2ab64e19 *extdata/samplebam/srt.BreastPatient_37.bam.bai
1e35c2ce9c825b2b3a371cba3f86f97b *extdata/samplebam/srt.BreastPatient_38.bam
ad8de435e740fc9d882daa6b5747ab48 *extdata/samplebam/srt.BreastPatient_38.bam.bai
9e19dcd4fb15b3ec7bd4464b78dd1ed0 *extdata/samplebam/srt.BreastPatient_39.bam
11eab3129804e29dc2c9befb5995ac0e *extdata/samplebam/srt.BreastPatient_39.bam.bai
09602f2d3e7a40c5b10ac42be031c150 *extdata/samplebam/srt.BreastPatient_4.bam
1bbedfac49dd317663396229acad3733 *extdata/samplebam/srt.BreastPatient_4.bam.bai
493efd95c8cd3c84587d8d1159c87dfa *extdata/samplebam/srt.BreastPatient_40.bam
6842379cf824f705761cd98b44d78ad7 *extdata/samplebam/srt.BreastPatient_40.bam.bai
6da3fa7362636e58084a82b7f9729305 *extdata/samplebam/srt.BreastPatient_41.bam
f9de61678caa0f8d1066164e293bddc6 *extdata/samplebam/srt.BreastPatient_41.bam.bai
a14f7f2373b6e0f1b7e1eafadcfb5c62 *extdata/samplebam/srt.BreastPatient_42.bam
8d771416d347e73577236b4ac21834a1 *extdata/samplebam/srt.BreastPatient_42.bam.bai
8cf404900efcd5ffc2813772ffafdaac *extdata/samplebam/srt.BreastPatient_43.bam
55d6073fb05ecf1f07ee6439450b09eb *extdata/samplebam/srt.BreastPatient_43.bam.bai
83ce6b07d01135de106d215e297f9c73 *extdata/samplebam/srt.BreastPatient_44.bam
b455d29ed91baeba42278b6b950cdbe1 *extdata/samplebam/srt.BreastPatient_44.bam.bai
6280893ea10fe3dfcbf5f0f8feb0cdb8 *extdata/samplebam/srt.BreastPatient_45.bam
3e619e4b840cef2b23dee6cd17f62bf6 *extdata/samplebam/srt.BreastPatient_45.bam.bai
4db71ad9a163ce307bd27f2bfc1e6cca *extdata/samplebam/srt.BreastPatient_46.bam
1ede1aae217711ca526dc3139c1edb4b *extdata/samplebam/srt.BreastPatient_46.bam.bai
ad1262696be8e4c9d1cf686ef08a0efd *extdata/samplebam/srt.BreastPatient_47.bam
e0f6ba72ca4873eef0330cc6460ef89c *extdata/samplebam/srt.BreastPatient_47.bam.bai
f7136e010b90aa0b78a8554fc95d2cf3 *extdata/samplebam/srt.BreastPatient_48.bam
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8a5be0a09a4e29c5e021e300821486ea *extdata/samplebam/srt.BreastPatient_49.bam
16bb097c5b14ad5e01503b4d106da387 *extdata/samplebam/srt.BreastPatient_49.bam.bai
33f033956dd3d7c040e5e0a9f12743de *extdata/samplebam/srt.BreastPatient_5.bam
6c290b2baa1f3a8f22c2a63eeba39e16 *extdata/samplebam/srt.BreastPatient_5.bam.bai
0da2a7d3a8a3fc628547fa9030708d72 *extdata/samplebam/srt.BreastPatient_50.bam
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b17d9d694bf7fe1372dab9bbe4c7d541 *extdata/samplebam/srt.BreastPatient_6.bam
b91fd8503e5b986ed5fe2b04c864bc8a *extdata/samplebam/srt.BreastPatient_6.bam.bai
7b65a33bb27bf3bc572d86aab3e25bc0 *extdata/samplebam/srt.BreastPatient_7.bam
9d88df3f05e240fe9db2611ae475fe7f *extdata/samplebam/srt.BreastPatient_7.bam.bai
8c8faa3568527054ff0942b9da206884 *extdata/samplebam/srt.BreastPatient_8.bam
62c026e5160e126103e067bfdf46697e *extdata/samplebam/srt.BreastPatient_8.bam.bai
f9f5089082ba10bdd94877a5765d408e *extdata/samplebam/srt.BreastPatient_9.bam
4f9cd779dfb269f76cb288a440d5acae *extdata/samplebam/srt.BreastPatient_9.bam.bai
c6bb133e0bc3d9c9679cf7ed648ec428 *help/AnIndex
44615516e897a88f99ddbe551f892617 *help/IMAS.rdb
55dc357db3f91a9b588db02f99692d82 *help/IMAS.rdx
dbcc7d22cb4990168e5a1a64cf8ace6d *help/aliases.rds
08c49790524a0138b9c3c49ff1e86eab *help/paths.rds
4d0af4fe164560bbbf2980d12cf27f39 *html/00Index.html
6e99c76a0a025eb57b5055d36365b438 *html/ASvisualization.html
db3c5a43fbbe199bb415c83a9321a1a6 *html/ClinicAnalysis.html
b0ca84676c2312ff863f3d93660db976 *html/Clinical.data.html
db9f8127a1400f13790863f6410ea1fe *html/CompGroupAlt.html
e8e3d45f194b4c3a4eab06c36aa284c4 *html/ExonsCluster.html
34f5c9fb8e4b778ce2f28a4dcf117137 *html/GroupSam.html
20cc8ab0d98ac0201e70a4c11f916de2 *html/IMAS-package.html
9f5c68f1ac12d3ade8d652f707c30dd7 *html/MEsQTLFinder.html
b6763e6916890c631fdc3f2643803b1a *html/R.css
41d33f99696c0420385b1e0a8aed02ba *html/RatioFromReads.html
f4ef3ba8dd5b15f0c23c2c065631053d *html/SplicingReads.html
1b40350235bbeabeb4e46f1f9ac9c4cc *html/sampleMedata.html
18a741ca3e2c60326067ab98849e9e1e *html/sampleMelocus.html
152c3c407e8700903a993b15c836c773 *html/samplebamfiles.html
7dbcf67c4bca903f72a7d2b9907f7058 *html/samplesnp.html
558c95bc92fa44d958f986f98a3da976 *html/samplesnplocus.html
d84c7bdf3b215f0a657f3b7002ccc1c1 *unitTests/test_functions.R
