boundaryTurbo_F	boundaryTurbo_F
boundaryTurbo_Q	boundaryTurbo_Q
calcPMSLikelihood	calcPMSLikelihood
convertFromTurbo_F	convertFromTurbo_F
convertFromTurbo_Q	convertFromTurbo_Q
convertToTurbo_F	convertToTurbo_F
convertToTurbo_Q	convertToTurbo_Q
EstimatedParameters-class	EstimatedParameters-class
getLogLikelihoodC	getLogLikelihoodC
getMutationFeatureVector	getMutationFeatureVector
hildaBarplot	hildaBarplot
hildaDiffPlot	hildaDiffPlot
hildaGlobalResult	hildaGlobalResult
hildaLocalResult	hildaLocalResult
hildaPlotSignature	hildaPlotSignature
hildaReadMPFile	hildaReadMPFile
hildaRhat	hildaRhat
hildaTest	hildaTest
MetaInformation-class	MetaInformation-class
MutationFeatureData-class	MutationFeatureData-class
mySquareEM	mySquareEM
pmBarplot	pmBarplot
pmgetSignature	pmgetSignature
pmMultiBarplot	pmMultiBarplot
pmPlotSignature	pmPlotSignature
PMSboundary	PMSboundary
updateMstepFQC	updateMstepFQC
updatePMSParam	updatePMSParam
updateTheta_NormalizedC	updateTheta_NormalizedC
visPMS	visPMS
