HMMcopy-package	HMMcopy-package
correctReadcount	correctReadcount
HMMcopy	HMMcopy-package
HMMcopy-dataset	HMMcopy-dataset
HMMcopy-internal	HMMcopy-internal
HMMsegment	HMMsegment
normalize	HMMcopy-internal
normal_copy	HMMcopy-dataset
plotBias	HMMcopy-visualize
plotCorrection	HMMcopy-visualize
plotParam	HMMcopy-visualize
plotSegments	HMMcopy-visualize
rangedDataToSeg	HMMcopy-output
rangedDataToWig	HMMcopy-output
stateCols	HMMcopy-visualize
tumour	HMMcopy-dataset
tumour_copy	HMMcopy-dataset
tumour_param	HMMcopy-dataset
tumour_reads	HMMcopy-dataset
tumour_segments	HMMcopy-dataset
wigsToRangedData	wigsToRangedData
wigToArray	HMMcopy-input
wigToRangedData	HMMcopy-input
