6860b8d3a9a15e8882bd37d9ecf96e84 *CITATION
f72190bed3d8de99c6fe2ee57533addf *DESCRIPTION
6d9a97b0a78362a7ca8105e9c87c36d8 *INDEX
f2943d70eb3f3b1ac6e9f3fcaa5acd97 *Meta/Rd.rds
1d15b8cd6573641f81c4126b0438e9c2 *Meta/features.rds
d3ff19064c9c8b481beae90d19e85e3b *Meta/hsearch.rds
8b17e4cef0f20f9622c4d872556eaae3 *Meta/links.rds
1baadc7b929d7fb4483aa99ac71c1e75 *Meta/nsInfo.rds
643c74cf780055b7258d041defb863d9 *Meta/package.rds
3381f6168827a1740f6134383ff2c004 *Meta/vignette.rds
e73ebcfcb0c28040e4178b69f9ebedf6 *NAMESPACE
b7bca2119044e100b779753a53f8545a *NEWS
d6c68f1fe41ced6e98a766a3757313da *R/CNVRanger
25449d53455d95e4b0aae803943b01fe *R/CNVRanger.rdb
a28234b9ab201d12b6bb15d8296c89ad *R/CNVRanger.rdx
cda1fabe04a703f2d03747a3bc68867c *doc/CNVRanger.R
95647d8d5c9a541bfda86a3b42a6ea9a *doc/CNVRanger.Rmd
94460414a0620068cff41130a05e097d *doc/CNVRanger.html
62d8a52b9a30efa127c214852ac82ec2 *doc/index.html
c5343759f0a014da9875d14a7fd5e5ea *extdata/CNVOut.txt
6a58cc97f0bb5d688240766564d61505 *extdata/CNVOut_noMap.txt
9fe14aa70e860411803e7e5fb8b4ea7a *extdata/GBM_GISTIC_peaks.rda
9c8027d08167db5252c991b1dcb96036 *extdata/GT1068.cnv.txt.adjusted
b191da6c9489316c6d41eca48e2e9b54 *extdata/GT112.cnv.txt.adjusted
ee407d24bd87142ff186a15045548d30 *extdata/GT1195.cnv.txt.adjusted
6d46dcf9dcac4c7d127501bdfc7de7c2 *extdata/GT1334.cnv.txt.adjusted
4dcf5ee8095c2fbf4612a3bdd9fc40f0 *extdata/GT175.cnv.txt.adjusted
c6185eafc72d3d819460c3cc76f2eaa0 *extdata/GT2391.cnv.txt.adjusted
3c6f17d1bef6e7137947130544e701c5 *extdata/GT356.cnv.txt.adjusted
d73a6e9724d76401baa764f5982d5d4c *extdata/GT546.cnv.txt.adjusted
b9057b3b49ba9b7e00cd700b5a62baf2 *extdata/GT622.cnv.txt.adjusted
c75dc60c5e0f7e78b07e27c1dfa76ac0 *extdata/GT911.cnv.txt.adjusted
a7f3a9565266e574843aa3a283f338a4 *extdata/MapPenn.txt
cb9d4d13fec59d74e29260269e67b1a9 *extdata/Parus_major_chr_sizes.txt
860143afea52eebff90414d2150a9619 *extdata/Pheno.txt
1b7378e5c916b7a805ab299fc608a8ff *extdata/Silva16_PONE_CNV_calls.csv
189ff3fdc582d0a5582245d3e9c648e9 *extdata/counts_cleaned.txt
1eebb7f4b33675b2bac6cc8e1ab0d4b6 *help/AnIndex
5e395936e049f98725b60bdcf0c68c53 *help/CNVRanger.rdb
7416183ec54ca952e8ba0ad717b9df12 *help/CNVRanger.rdx
aafb3458d249e78b9462a8e92825fe8b *help/aliases.rds
2143ce22d2609d29c81c364251d09851 *help/paths.rds
4f4ccff0752238db6ae83fa5bc19b8b9 *html/00Index.html
b6763e6916890c631fdc3f2643803b1a *html/R.css
5b26b6a4f06e235dd49af58d74a48cc6 *html/cnvEQTL.html
896a6b817c65b5c0a53351ecdc601583 *html/cnvGWAS.html
56fbd722967aa5b8688044ca0588ef29 *html/cnvOncoPrint.html
9746138da89838dacc50168a71a72ce0 *html/generateGDS.html
0d205a85c273a4b14af5afcdde8745fb *html/importLrrBaf.html
5d061513b33d6546bc95cfe07e4a466c *html/plotEQTL.html
f04b3212abb30bf30a41ba62dec9849a *html/plotManhattan.html
9d27c23ef6f1be185fdb0d71de192706 *html/plotRecurrentRegions.html
9f1f8b29403f936113b567e8c02ad918 *html/populationRanges.html
95d9dd4d017baeb38d54680ec09ae356 *html/setupCnvGWAS.html
e0b9bfc0963880df0207ebaf73aba5a8 *vignettes/CNVRanger.png
034ae3351afb42a7975e3817f38d5ea0 *vignettes/CNVsegments.png
c49d479e5c97b8ab9d441dcc3e0c3420 *vignettes/Expression.png
3afbbc51fa5423bda827fef675acdae6 *vignettes/Input.png
3c482e35f515ad3370f4e28e25b3d0f4 *vignettes/Overlap.png
f557c49e6a8636491e7994d852c31992 *vignettes/Phenotype.png
08af82bda00ef3001e376aed18fb374d *vignettes/Summarization.png
