JASPAR2018_CORE_DBSCORES {universalmotif} | R Documentation

## JASPAR2018 CORE database scores

### Description

For use with `compare_motifs()`. The precomputed scores allow for fast P-value estimation. These scores were generated using `make_DBscores()` with the JASPAR2018 CORE motif set. The scores are organized in a `DataFrame`. In this `DataFrame` is the location and scale of scores resulting from a logistic distribution using the the comparisons of JASPAR2018 CORE motifs with randomized motifs of the specified `subject` and `target` motif length. Created using `make_DBscores()` from universalmotif v1.4.0. The parameters used can be seen via `S4Vectors::metadata(JASPAR2018_CORE_DBSCORES)`.

### Usage

    JASPAR2018_CORE_DBSCORES

### Format

`DataFrame` with function args in the `metadata` slot.

[Package universalmotif version 1.4.10 Index]