associated_peaks        Predict associated peaks
direct_targets          Predict direct targets
find_distance           Find the distance between peaks and regions
merge_ranges            Merge peaks and regions GRanges
plot_predictions        Plot the ECDF of ranks by groups
rank_product            Calculate the regions rank products
real_peaks              AR peaks in LNCaP cell line
real_transcripts        Differential expression of DHT treated LNCaP
                        cell line
score_peaks             Calculate peak scores
score_regions           Calculate region scores
sim_peaks               Simulated peaks
sim_transcripts         Simulated transcripts The transcripts
                        chromosome 1 of the mm10 mouse genome with
                        randomly singed statistics assigned to each.
target                  'target': Predict Combined Function of
                        Transcription Factors.
target_app              Run the shiny App
test_predictions        Test the ECDF ranks of groups are from same
                        distribution
