Package: target
Type: Package
Title: Predict Combined Function of Transcription Factors
Version: 1.0.0
Authors@R: person("Mahmoud", "Ahmed",
    email = "mahmoud.s.fahmy@students.kasralainy.edu.eg",
    role = c("aut", "cre"))
Description: Implement the BETA algorithm for infering direct target
    genes from DNA-binding and perturbation expression data Wang et al. (2013)
    <doi: 10.1038/nprot.2013.150>. Extend the algorithm to predict the combined
    function of two DNA-binding elements from comprable binding and expression 
    data.
URL: https://github.com/MahShaaban/target
BugReports: https://github.com/MahShaaban/target/issues
License: GPL-3
Encoding: UTF-8
LazyData: true
Depends: R (>= 3.6)
Imports: BiocGenerics, GenomicRanges, IRanges, matrixStats, methods,
        stats, graphics, shiny
Suggests: testthat (>= 2.1.0), knitr, rmarkdown, shinytest, shinyBS,
        covr
VignetteBuilder: knitr
RoxygenNote: 6.1.1
biocViews: Software, StatisticalMethod, Transcription
git_url: https://git.bioconductor.org/packages/target
git_branch: RELEASE_3_10
git_last_commit: 3cae12e
git_last_commit_date: 2019-10-29
Date/Publication: 2019-10-29
NeedsCompilation: no
Packaged: 2019-10-30 05:08:36 UTC; biocbuild
Author: Mahmoud Ahmed [aut, cre]
Maintainer: Mahmoud Ahmed <mahmoud.s.fahmy@students.kasralainy.edu.eg>
Built: R 3.6.1; ; 2019-10-30 14:19:06 UTC; windows
