plotIndividualTracks {sojourner} | R Documentation

## plotIndividualTracks

### Description

Plot individual tracks one by one, with grid layout. Tracks are sorted by their lengths.

### Usage

    plotIndividualTracks(trackll=trackll,grid.size=c(1000,1000),
    resolution=0.107,t.interval=0.5)

### Arguments

`trackll` | trajectory list generated by createTrackll() and processing.
`grid.size` | The size of each plot grid in nanometers. Default 1000 nm for x and y axis, respectively.
`resolution` | ratio of pixel to uM.
`t.interval` | Time interval for image aquisition. Default 0.5 sec (500ms).

### Details

Plot individual track/trajectory one by one, and the tracks will be layout in 15X8 grids.

### Value

- PDF: One PDF file with 120 tracks on each page.

### Examples

    # Generate trackll, and process,
    # e.g. mask region of interest, tracks from multiple files should not be
    # merged.
    folder=system.file('extdata','HSF',package='sojourner')
    trackll=createTrackll(folder=folder, input=3)
    trackll=filterTrack(trackll,filter=c(7,Inf))
    trackll=maskTracks(folder,trackll)
    trackll=mergeTracks(folder, trackll)

    # Plot individual tracks,
    plotIndividualTracks(trackll,grid.size=c(1000,1000),resolution=0.107,
                         t.interval=0.5)

[Package sojourner version 1.0.2 Index]